Pairwise Alignments

Query, 412 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 416 a.a., porin from Pseudomonas simiae WCS417

 Score =  600 bits (1547), Expect = e-176
 Identities = 290/411 (70%), Positives = 344/411 (83%), Gaps = 6/411 (1%)

Query: 8   PFALLGAGVIAGL--PGTSLAAGFVEDGKATLGLRNFYINRNFTNPSNPQSKAEEWTQSF 65
           P  LL A  +A L  P  +   GF+ED  A L LRNF+ NRN+TNP+  Q  A+EWTQSF
Sbjct: 6   PRRLLLATAVASLALPVVAEEHGFLEDASANLNLRNFFFNRNYTNPTKAQGGAQEWTQSF 65

Query: 66  ILDARSGFTEGPIGFGVDVLGLWSVKLDGGGGTYGTALLPRHDDGRPADDYGRLAVAGKA 125
           ILDA+SGFT+G +GFGVDVLGL+S+KLDGG GT GT LLP   DGRPAD++GRL VA KA
Sbjct: 66  ILDAKSGFTQGTVGFGVDVLGLYSLKLDGGRGTGGTQLLPLDHDGRPADEFGRLGVAFKA 125

Query: 126 RISKTELKIGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGGQFRGNSPRNDA 185
           RISKTE+K+GEWMPVLPILRSDDGRSLPQT RGGQ+TS EI GLTLYGGQFR NSPR+D+
Sbjct: 126 RISKTEVKVGEWMPVLPILRSDDGRSLPQTLRGGQITSKEIDGLTLYGGQFRANSPRDDS 185

Query: 186 SMEDMSYGGG---VSDRFNFVGGEYKFNQDRTQVGLWNAVLKDVYQQQYLQLSHSQPVGD 242
           SM D+S  G     SDRFNF G EY FN  RTQ+GLWNA LKD+Y QQ++ L HSQP+G+
Sbjct: 186 SMNDLSMFGKTAFTSDRFNFQGAEYAFNDKRTQIGLWNAQLKDIYSQQFINLIHSQPLGN 245

Query: 243 WTLGANLGYFHGDEDGSERAGQLDNKTYSGMFSAKYGGSTFWVGLQKVDGDT-WMRVNGT 301
           WTLGANLG+F+G +DGS RAG+LDNKT+SG+FSAKYGG+TF++GLQK+ G++ WMRVNGT
Sbjct: 246 WTLGANLGFFYGKDDGSARAGELDNKTWSGLFSAKYGGNTFYLGLQKLTGNSAWMRVNGT 305

Query: 302 SGGTLANDSYNSSFDNANERSWQVRHDFNFVTVGVPGLTLMNRYISGRDVHSGGVTDGKE 361
           SGGTLANDSYN+S+DNA E+SWQVRHD+NF  +GVPGLTLMNRYISG +VH+G VTDGKE
Sbjct: 306 SGGTLANDSYNASYDNAQEKSWQVRHDYNFAALGVPGLTLMNRYISGSNVHTGTVTDGKE 365

Query: 362 WVRETELAYVIQSGAFKDLSVKWRNSSIRRDYSNNEFDENRLIFNYPLSLL 412
           W RE+EL Y +QSG+ K+L+V+ RNSS+RRDYSNNEFDENRLI +YP+SLL
Sbjct: 366 WGRESELGYTVQSGSLKNLTVRLRNSSMRRDYSNNEFDENRLIVSYPISLL 416