Pairwise Alignments

Query, 412 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  219 bits (558), Expect = 1e-61
 Identities = 145/443 (32%), Positives = 219/443 (49%), Gaps = 39/443 (8%)

Query: 8   PFALLGAGVIAGLPGTSLAA-----GFVEDGKATLGLRNFYINRNFTNP----SNPQSKA 58
           P  L     +AG+    +AA     GF+E    ++  RNFY NR+  +      NP  +A
Sbjct: 6   PLTLAACLALAGVGSQVVAAEKSADGFMEGSTLSVLNRNFYFNRDNRDSVAPTHNPSKQA 65

Query: 59  -----EEWTQSFILDARSGFTEGPIGFGVDVLGLWSVKLDGGGGTYGTA----LLPRHDD 109
                E W  + I    SGFT+G +G G+D   +  +KLD GGG  G      +LP   D
Sbjct: 66  DNGYSEAWGHAVITRFESGFTQGTVGVGLDAFAMLGLKLDTGGGRNGGRSSFDVLPVDRD 125

Query: 110 GRPADDYGRLAVAGKARISKTELKIGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAGL 169
           G+  D+Y ++  A K R+  T LK+G+  P  P++ + D R LP++FRG  + ++ I  L
Sbjct: 126 GQARDEYTKVGGAAKLRLFDTVLKVGDVFPANPVVAAGDSRLLPESFRGVTLENSSIKDL 185

Query: 170 TLYGGQFRGNSPRNDASMED---MSYGGGV-SDRFNFVGGEYKFNQDRTQVGLWNAVLKD 225
           TL  G+    S    + + +     YGG V S    + GG+Y+ N+    V L+++ LKD
Sbjct: 186 TLQAGRLHAMSQPMSSDLRENFVTFYGGPVDSPWIAYGGGDYRLNE-HVSVSLFSSRLKD 244

Query: 226 VYQQQYLQLSHSQPVGD-WTLGANLGYFHGDEDGSERAGQLDNKTYSGMFSAKYGGSTFW 284
            + Q Y   S S P+ +   L     Y+   ++G +R G  DN  +S     ++G  T  
Sbjct: 245 AWNQYYAGTSLSWPLSEALALIGGFNYYKAVDEGQQRLGAFDNDIWSAKLGVRFGAHTLA 304

Query: 285 VGLQKVDGDTWMRVNGTSGGTLANDSYN-SSFDNANERSWQVRHDFNFVTVGVPGLTLMN 343
           +  Q+ +GD        S     ++S   S F+   ERSW +R+D N    GVPGL+ M 
Sbjct: 305 LTHQRNNGDDDFDYLRQSDSIFLDNSIQYSDFNAPKERSWMLRYDLNMAAYGVPGLSFMT 364

Query: 344 RYISG--------------RDVHSGGVTDGKEWVRETELAYVIQSGAFKDLSVKWRNSSI 389
           RY  G              RDV    +TD K W R+ E+ YV+Q+GA KDLS++ R ++ 
Sbjct: 365 RYGKGNDADYSNANATYMRRDVAGNPLTDQKRWERDIEVKYVVQTGAAKDLSLRVRQATT 424

Query: 390 RRDYSNNEFDENRLIFNYPLSLL 412
           R     ++ DE R+I  YPLS+L
Sbjct: 425 RATAFESDLDEVRMIVEYPLSIL 447