Pairwise Alignments

Query, 412 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 426 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  254 bits (650), Expect = 3e-72
 Identities = 146/401 (36%), Positives = 219/401 (54%), Gaps = 22/401 (5%)

Query: 27  AGFVEDGKATLGLRNFYINRNFTNPSNPQSKAEEWTQSFILDARSGFTEGPIGFGVDVLG 86
           A F+ DG  +L LRNFY +R+F   S  QS+  EW Q F+L  +SG+T+G +GFG+D  G
Sbjct: 24  AAFIHDGSGSLELRNFYFDRDFHGDSATQSRRGEWAQGFMLRLQSGYTDGVVGFGLDAAG 83

Query: 87  LWSVKLDGGGGTYGTALLPRHDDGRPADDYGRLAVAGKARISKTELKIGEWMPVLPILRS 146
           +  +KLD      G+ LLPR  D R ADDY +     KAR++++ELK G   P LP+L S
Sbjct: 84  MLGLKLDSSPDRSGSGLLPRGSDKRAADDYAKAVATFKARLAQSELKAGGLSPQLPLLAS 143

Query: 147 DDGRSLPQTFRGGQVTSNEIAGLTLYGGQFRGNSPRNDASMEDM-------SYGGGV-SD 198
           +  R  PQ F G Q+ S ++   T    Q      R+    ED+       +Y   V SD
Sbjct: 144 NSSRLFPQWFNGVQLVSKDLDRFTFTLLQVDATKLRDSTDYEDLTAMAQQGAYSATVTSD 203

Query: 199 RFNFVGGEYKFNQDRTQVGLWNAVLKDVYQQQYLQLSHSQPVGDWTLGANLGYFHGDEDG 258
           R  + G +Y+   + T + L  +VL+D++++ +        +G   +     +F+  E G
Sbjct: 204 RLRYAGVDYQPLNNLT-LSLHTSVLEDLFRRDFAGFKFKTRLGPGDVFTEWRWFNAREQG 262

Query: 259 SERAGQLDNKTYSGMFSAKYGGSTFWVGLQKVDGDTWMRVNGTSGGTLANDSYNSSFDNA 318
               G +DN+T S  F     G TF  G QKV GDT     G +   L ++   S+F  A
Sbjct: 263 RALLGGVDNQTLSTNFGYSVQGHTFSGGYQKVRGDTAYAYVGGTDTYLFSEQQVSTFALA 322

Query: 319 NERSWQVRHDFNFVTVGVPGLTLMNRYISGRDVH------------SGGVTDGKEWVRET 366
           NER+W +R+D+NF  VG+PGLT   RY+ G  V             + G  +G+EW R T
Sbjct: 323 NERAWMLRYDYNFAAVGIPGLTFNVRYVKGDQVDPQRIASVKGRALAAGDGEGREWERTT 382

Query: 367 ELAYVIQSGAFKDLSVKWRNSSIRRDYSNNEFDENRLIFNY 407
           ++ YV+QSGA +++S++WRN+S+R +++ +  DENR+I  Y
Sbjct: 383 DITYVVQSGALRNVSLRWRNASMRSNFA-DAADENRVIVGY 422