Pairwise Alignments

Query, 412 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 417 a.a., phenylacetic acid-specific porin from Pseudomonas putida KT2440

 Score =  302 bits (774), Expect = 1e-86
 Identities = 163/389 (41%), Positives = 235/389 (60%), Gaps = 6/389 (1%)

Query: 27  AGFVEDGKATLGLRNFYINRNFTNPSNPQSKAEEWTQSFILDARSGFTEGPIGFGVDVLG 86
           A F+ D  A L LRN YINR+F   + PQ+KAEEW Q F     SGFTEGP+GFGVD LG
Sbjct: 30  ADFIGDSHARLELRNHYINRDFRQSNAPQAKAEEWGQGFTAKLESGFTEGPVGFGVDALG 89

Query: 87  LWSVKLDGGGGTYGTALLPRHDDGR-PADDYGRLAVAGKARISKTELKIGEWMPVLPILR 145
              +KLD       T LLP   +   P DDY  L + GK R+SK+ L++G   P+LP++ 
Sbjct: 90  QLGIKLDSSRDRRNTGLLPFGPNSHEPVDDYSELGLTGKVRVSKSTLRLGTLQPILPVVV 149

Query: 146 SDDGRSLPQTFRGGQVTSNEIAGLTLYGGQFRGNSPRNDASMEDMSYGGGVSDRFNFVGG 205
            +D R L  +F+GG +TS ++ GLT   G+    + R+ +  +D+ YG   SD  +F GG
Sbjct: 150 YNDTRLLASSFQGGLLTSQDLDGLTFNAGRLTKANLRDSSGRDDIGYGAASSDHLDFGGG 209

Query: 206 EYKFNQDRTQVGLWNAVLKDVYQQQYLQLSHSQPVGDW-TLGANLGYFHGDEDGSERAGQ 264
            Y     +T V  + A L+D+Y+QQ++ L  ++P+ +  +L ++L YF    DG+ERAG 
Sbjct: 210 SYAITP-QTTVSYYYAKLQDIYRQQFVGLIDTRPLAEGVSLRSDLRYFDSRNDGAERAGN 268

Query: 265 LDNKTYSGMFSAKYGGSTFWVGLQKVDGDT-WMRVNGTSGGTLANDSYNSSFDNANERSW 323
           +DN+ ++ MF+       F    Q++ GD+ +  VNG    T+   +YN+ F  A   SW
Sbjct: 269 IDNRNFNAMFTLGVRAHKFTATWQQMSGDSAFPFVNGGDPFTVNLVTYNT-FTRAGLDSW 327

Query: 324 QVRHDFNFVTVGVPGLTLMNRYISGRDVHSGGVTDGKEWVRETELAYVIQSGAFKDLSVK 383
           QVR+D++FV +G+PGL+ M RY  GR   +  VT+G+E  R+T++ YVIQSG FKD+S++
Sbjct: 328 QVRYDYDFVAMGIPGLSFMTRYTDGRHAETATVTNGRERERDTDITYVIQSGPFKDVSLR 387

Query: 384 WRNSSIRRDYS-NNEFDENRLIFNYPLSL 411
           WRN + R      N  DENRLI  Y L+L
Sbjct: 388 WRNVTFRSGNGLTNAVDENRLIIGYTLAL 416