Pairwise Alignments

Query, 412 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 416 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  340 bits (873), Expect = 4e-98
 Identities = 183/416 (43%), Positives = 254/416 (61%), Gaps = 12/416 (2%)

Query: 5   HTLPFALLGAGVIAGLPGTSLAAGFVEDGKATLGLRNFYINRNFTN--PSNPQSKAEEWT 62
           HT P   LG  +++  P  +   GF ED KATL  RN+Y +R+F++   +N QSKAEEW 
Sbjct: 3   HT-PCVALGLTLLSQ-PLLAAEGGFFEDSKATLSARNYYFSRDFSDIVGANKQSKAEEWA 60

Query: 63  QSFILDARSGFTEGPIGFGVDVLGLWSVKLDGGGGTYGTALLPRHDDGRPADDYGRLAVA 122
           Q FILD +SG+T GP+GFGVD LGL  +KLD       T LLP H DGR AD+Y RLA  
Sbjct: 61  QGFILDFKSGYTPGPVGFGVDALGLLGIKLDSSPDRTNTGLLPVHGDGRAADEYSRLAPT 120

Query: 123 GKARISKTELKIGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGGQFRGNSPR 182
            KAR+SKTEL+ GE  P LP+L   D R LP T++G  ++S+EI GLT+  G  +    R
Sbjct: 121 FKARLSKTELRAGELQPNLPVLTFSDIRLLPPTYQGVSLSSSEIDGLTMQAGHLKSTHLR 180

Query: 183 ND-------ASMEDMSYGGGVSDRFNFVGGEYKFNQDRTQVGLWNAVLKDVYQQQYLQLS 235
           N+       A +  +      SD FN+VGG+Y FN +++ V LW   L+D+YQQ ++ L 
Sbjct: 181 NEGGDGKMNAMLGHVPMRQAESDAFNYVGGDYAFNANQSSVSLWYGQLEDIYQQGFVGLK 240

Query: 236 HSQPVGDWTLGANLGYFHGDEDGSERAGQLDNKTYSGMFSAKYGGSTFWVGLQKVDGDTW 295
           HS+PVGDW L ANLGYF   E G    G +DN+ +  +F+A++GG +F  G Q + GD+ 
Sbjct: 241 HSKPVGDWVLSANLGYFTAREQGDALLGNIDNQAFFSLFTARHGGHSFHAGYQGIYGDSP 300

Query: 296 MRVNGTSGGTLANDSYNSSFDNANERSWQVRHDFNFVTVGVPGLTLMNRYISGRDVHSGG 355
                 +   L N+     F   +ERS+QVR+D+NF  +GVPGLT   RYI+G +V +G 
Sbjct: 301 FPRVFANISPLGNEVPTYEFAYTDERSYQVRYDYNFAAMGVPGLTATVRYITGNNVDTGL 360

Query: 356 VTDGKEWVRETELAYVIQSGAFKDLSVKWRNSSIRRDYSNNEFDENRLIFNYPLSL 411
             +G++  R+ ++ Y +QSGA K L ++ RN+  R +Y  ++ DENRL   Y   L
Sbjct: 361 GYEGRDRERDLDIGYAVQSGALKGLGIRVRNAMARSNY-RSDIDENRLTLVYTWQL 415