Pairwise Alignments

Query, 412 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 449 a.a., putative OprD family outer membrane porin from Pseudomonas putida KT2440

 Score =  233 bits (595), Expect = 7e-66
 Identities = 153/420 (36%), Positives = 224/420 (53%), Gaps = 37/420 (8%)

Query: 28  GFVEDGKATLGLRNF-----YINRNFT-NPSNP--QSKAEEWTQSFILDARSGFTEGPIG 79
           GF++  +  +  RNF     Y N +FT NP+N   QS   EW    I + +SGFT G +G
Sbjct: 29  GFIDGTRVHVLNRNFFFSQDYRNGDFTLNPNNGERQSLHREWGHGIIANLQSGFTRGTVG 88

Query: 80  FGVDVLGLWSVKLDGGGGTYGTAL-LP-------RHDDGRPADDYGRLAVAGKARISKTE 131
           FGVDV GL  +KLDGG G  G  + +P        + DG P D YG++  A K R   TE
Sbjct: 89  FGVDVQGLVGLKLDGGNGAVGNGVGVPGIVSRSGSNFDGEPKDSYGKVGTALKVRAFDTE 148

Query: 132 LKIGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGGQFRGNSPRNDASME-DM 190
           L+ G+  P  P+L + D R LPQT RG    +N + GL+L GG+   +S RN ++   D+
Sbjct: 149 LRYGDVSPTSPVLHASDIRLLPQTLRGFIFNNNSLDGLSLQGGKLESSSDRNASNHRGDL 208

Query: 191 S--YGGGV--SDRFNFVGGEYKFNQDRTQVGLWNAVLKDVYQQQYLQLSHSQPVG-DWTL 245
              Y G +  ++   ++GG+Y+FN D+  + L ++ L DV+ Q +  + H QP+G + +L
Sbjct: 209 GTVYAGRIKGANDVVYLGGDYRFN-DQLTLRLHSSRLDDVWNQSFFSVDHVQPLGSELSL 267

Query: 246 GANLGYFHGDEDGSERAGQLDNKTYSGMFSAKYGGSTFWVGLQKVDGDT-WMRVNGTSGG 304
              L Y+   + G   AGQ+DN ++S       G   F +   ++DGDT +  V  T   
Sbjct: 268 KTGLNYYRTRDSGQALAGQIDNDSWSVHAGLAAGAHGFKLSYTRIDGDTPFDYVWNTYDL 327

Query: 305 TLANDSYNSSFDNANERSWQVRHDFNFVTVGVPGLTLMNRYISGRDV----------HSG 354
            L   S  S F+N NER+W+ R+D++F  +GVPGL+L  RY+ G D+          +  
Sbjct: 328 QLDAASQVSDFNNPNERAWEARYDYDFAPLGVPGLSLTARYVRGTDIDGTRAGGAYSYFN 387

Query: 355 GVTDGKEWVRETELAYVIQSGAFKDLSVKWRNSSIR---RDYSNNEFDENRLIFNYPLSL 411
           G  DG+ W R   L YV+QSG  KDLS     ++ R      + +  DE RLI  YPL +
Sbjct: 388 GTEDGRHWERNLWLKYVLQSGPAKDLSFNLMQATHRVGGDHVAESNVDELRLIVQYPLDI 447