Pairwise Alignments

Query, 412 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 410 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  554 bits (1427), Expect = e-162
 Identities = 276/414 (66%), Positives = 332/414 (80%), Gaps = 11/414 (2%)

Query: 4   CHTLPFALLGAGVIAGLPGTSLAAGFVEDGKATLGLRNFYINRNFTNPSNPQSKAEEWTQ 63
           C TL   +    + A LP  +LA GFV+D KA+L LRNFY+NR++T  ++ Q KAEEWTQ
Sbjct: 3   CRTLYPLVPTFALAASLPLQALAEGFVDDAKASLTLRNFYMNRDYTGTAS-QGKAEEWTQ 61

Query: 64  SFILDARSGFTEGPIGFGVDVLGLWSVKLDGGGGTYGTALLPRHDDGRPADDYGRLAVAG 123
           SFI D +SG+T G +GFGVDVLGL+S+KLDGG GT GT LLP HDDGRPADD+GR A+AG
Sbjct: 62  SFIFDFKSGYTPGVVGFGVDVLGLYSIKLDGGKGTAGTQLLPVHDDGRPADDFGRTALAG 121

Query: 124 KARISKTELKIGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGGQFRGNSPRN 183
           K R+S+TELK+GEW P LPILR+DDGRSLPQT +G QVTSNE+AGL+LYGGQFR NSPRN
Sbjct: 122 KMRVSRTELKVGEWSPTLPILRADDGRSLPQTLQGAQVTSNELAGLSLYGGQFRQNSPRN 181

Query: 184 DASMEDMSY---GGGVSDRFNFVGGEYKFNQDRTQVGLWNAVLKDVYQQQYLQLSHSQPV 240
           DASM+DMS        SDRFNF GGEY+FNQ+RT VG W A L+D+YQQ+Y Q+ H QP+
Sbjct: 182 DASMQDMSLFTRTAFTSDRFNFAGGEYRFNQERTLVGAWYAQLEDIYQQRYFQVQHQQPL 241

Query: 241 GDWTLGANLGYFHGDEDGSERAGQLDNKTYSGMFSAKYGGSTFWVGLQKVDG-DTWMRVN 299
           G+W LGANLGYF G +DG  +AG+L+N+T SG+FSAK GG+TF+VGLQKV G D W RVN
Sbjct: 242 GNWVLGANLGYFWGKDDGGAKAGELNNRTASGLFSAKLGGNTFYVGLQKVMGDDEWFRVN 301

Query: 300 GTSGGTLANDSYNSSFDNANERSWQVRHDFNFVTVGVPGLTLMNRYISGRDVHSGGVTDG 359
           G SGGTLAND++ SS+++A ERSWQVRHDFNFV +G+PGLTLMNRYI G +VH+   T G
Sbjct: 302 GASGGTLANDAFGSSYESARERSWQVRHDFNFVVLGIPGLTLMNRYIHGYNVHNAS-TQG 360

Query: 360 KEWVRETELAYVIQSGAFKDLSVKWRNSSIRRDY-SNNEFDENRLIFNYPLSLL 412
               RE+ELAYV+QSG FK L++KWRNSS RRD+ S N FDENRLI +YPLSLL
Sbjct: 361 ----RESELAYVVQSGPFKALNLKWRNSSQRRDWGSTNSFDENRLIVSYPLSLL 410