Pairwise Alignments

Query, 412 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 417 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  274 bits (701), Expect = 3e-78
 Identities = 154/410 (37%), Positives = 225/410 (54%), Gaps = 18/410 (4%)

Query: 15  GVIAGLPGTSLAAGFVEDGKATLGLRNFYINRNFTNPSNPQSKAE--------EWTQSFI 66
           G++ G    + AAGF+ED K  L LRN Y N NF +     ++A         EW Q F+
Sbjct: 12  GLLCGWLPVAGAAGFIEDSKLKLQLRNVYFNENFRDEQGMSARAAATAKSERVEWAQGFL 71

Query: 67  LDARSGFTEGPIGFGVDVLGLWSVKLDGGGGTYGTALLPRHDDGRPADDYGRLAVAGKAR 126
           LD +SGFT+G +G GVD +GL  V+LD G G  GT LLP HDDGR AD++    +  KAR
Sbjct: 72  LDYQSGFTQGTLGLGVDAMGLLGVRLDSGRGRSGTGLLPVHDDGRAADEFASAGITAKAR 131

Query: 127 ISKTELKIGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGG---QFRGNSPRN 183
           +  T +K G  +P  P+L  +D R LPQT++G Q+TS +I  LTL  G   +F+     +
Sbjct: 132 LGSTVVKHGTLLPKTPVLVYNDARLLPQTYQGTQLTSTDIDNLTLTAGHLDRFKQRDSSD 191

Query: 184 DASMEDMSYGGGVSDRFNFVGGEYKFNQDRTQVGLWNAVLKDVYQQQYLQLSHSQPVGDW 243
              +    YGG  S  F+F G +Y  ++ + ++  ++  L+  Y+Q +  L H  P+G  
Sbjct: 192 STGLYLDGYGGPASGDFSFAGADYAVSK-QLRLSYFHGELEHFYRQDFAGLVHDLPLGGG 250

Query: 244 TLGANLGYFHGDEDGSERAGQLDNKTYSGMFSAKYGGSTFWVGLQKVDGDTWM-RVNGTS 302
            L  +L YF   + G+   G +DN  +SG  S  + G T   G Q +DG+  +  ++G +
Sbjct: 251 VLTTDLRYFKSRDSGTAYGGGIDNDMFSGQLSYAHSGHTVGAGYQVLDGEAGLPYISGAT 310

Query: 303 GGTLANDSYNSSFDNANERSWQVRHDFNFVTVGVPGLTLMNRYISGRDVHSGGVTDG-KE 361
             + +N      F    E++W   + +NF   GVPGLT M RY+SG +  SGG  +G KE
Sbjct: 311 VYSFSNVGI-GKFIEEEEKTWMASYAYNFAAAGVPGLTFMTRYLSGDNGRSGG--EGIKE 367

Query: 362 WVRETELAYVIQSGAFKDLSVKWRNSSIRRDYSNNEFDENRLIFNYPLSL 411
           W R+ E+AYV+Q G  K L VK RN   R D++    D NRL   Y +++
Sbjct: 368 WERDAEIAYVVQGGPLKGLGVKLRNYVYRSDFARGR-DSNRLYLTYDIAI 416