Pairwise Alignments

Query, 412 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 444 a.a., outer-membrane porin E from Pseudomonas putida KT2440

 Score =  213 bits (541), Expect = 1e-59
 Identities = 152/439 (34%), Positives = 210/439 (47%), Gaps = 48/439 (10%)

Query: 15  GVIAGLPGTSLAAGFVEDGKATLGLRNFYINRNFTNPSNPQSKAEEWTQSFILDARSGFT 74
           GV+A   G   AAGFVED K +L  R  Y N +       Q   +E  Q F LD  SGFT
Sbjct: 13  GVLAQQAG---AAGFVEDSKLSLSSRTMYFNDDNRESGIDQ---KESGQGFKLDYLSGFT 66

Query: 75  EGPIGFGVDVLGLWSVKLDGGGGTYGTA---LLPRHDDGRPADDYGRLAVAGKARISKTE 131
           +G +GFGVDV  LW + LDGG G+   A     P   DG    D+ R+    KAR SKTE
Sbjct: 67  QGTVGFGVDVQALWGIHLDGGRGSRPDANNTFFPSDSDGSAVHDWARIGGNAKARFSKTE 126

Query: 132 LKIGEWM-PVLPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGGQFRGNSPRNDASMEDM 190
           +  G  + P+LPIL S+DGR LPQTF GG + S EI  LT+  GQ      R  ++   +
Sbjct: 127 VHYGSALAPMLPILVSNDGRLLPQTFEGGTLQSKEIDNLTINAGQLTHAMGRASSNRTGL 186

Query: 191 SYGGGV--SDRFNFVGGEYKFNQDRTQVGLWNAVLKDVYQQQYLQLSHSQPVGD-WTLGA 247
           S  G    S++F F GG+YK   D T +  + + L+D Y+Q +L  +H   + D  +   
Sbjct: 187 SVSGAFRDSNKFQFAGGDYKLTPDLT-LQYYYSNLEDFYKQHFLGATHVFKIADNQSFKT 245

Query: 248 NLGYFHGDEDG---------------SERAGQLDNKTYSGMFSAKYGGSTFWVGLQKVDG 292
           +L YF    DG               ++ +G++DNKT+S MF+   GG    +G Q+V  
Sbjct: 246 DLRYFDSSSDGKNGQTGYAFDNNGGYAKNSGEVDNKTWSAMFTYTLGGHALMLGHQQVGD 305

Query: 293 D---TWMRV--------------NGTSGGTLANDSYNSSFDNANERSWQVRHDFNFVTVG 335
           D    W+                NG +   L  DS  + F  A E +   ++ ++F  +G
Sbjct: 306 DGGFVWLNQGSVRKDGSTSSLEGNGGASFYLFTDSMINQFARAGENTTFGQYSYDFAALG 365

Query: 336 VPGLTLMNRYISGRDVHS-GGVTDGKEWVRETELAYVIQSGAFKDLSVKWRNSSIR-RDY 393
           VPGL     Y+ G DV +  G     EW R+  + Y +Q G  K L    R    R    
Sbjct: 366 VPGLKASVSYLRGDDVRNRSGDGTYNEWERDARVDYTLQEGTLKGLGFSLRQGVYRGSGE 425

Query: 394 SNNEFDENRLIFNYPLSLL 412
           S  + D+ R I NY  + L
Sbjct: 426 SALDKDQTRFIVNYTYNFL 444