Pairwise Alignments

Query, 412 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  228 bits (580), Expect = 4e-64
 Identities = 147/444 (33%), Positives = 217/444 (48%), Gaps = 39/444 (8%)

Query: 7   LPFALLGAGVIAGLPGTSLAA-----GFVEDGKATLGLRNFYINRN---FTNPS------ 52
           +P  L     ++G    S  A     GF+E    T+  RNFY NR+    T P+      
Sbjct: 5   VPLYLAAVSALSGSYAISAQAEDKPEGFIEGSSLTVLNRNFYFNRDNRDSTAPTYNSGKG 64

Query: 53  NPQSKAEEWTQSFILDARSGFTEGPIGFGVDVLGLWSVKLDGGGGTYGTA----LLPRHD 108
           N    +E W  + I    SGFT+G +GFGVD   +  +KLD G G  G      +LP  +
Sbjct: 65  NTNGYSEAWAHAIISKFNSGFTQGTVGFGVDAFAMIGLKLDTGDGRNGGRSSFDVLPVDN 124

Query: 109 DGRPADDYGRLAVAGKARISKTELKIGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAG 168
            G   D+Y ++  A K R+  T +K+G+  P  P++ S D R LP++FRG  V +  I G
Sbjct: 125 KGEARDEYTKVGGAAKVRLFDTIVKVGDVFPSTPVVASGDSRLLPESFRGVTVENTSIQG 184

Query: 169 LTLYGGQFRGNSPRNDASMED---MSYGGGV-SDRFNFVGGEYKFNQDRTQVGLWNAVLK 224
           LTL GG+    S    +++ D     YGG V S    + GG+Y  N D   V ++ + LK
Sbjct: 185 LTLQGGRLHAMSQPVSSNLNDNFVTFYGGPVNSPWIGYGGGDYSIN-DNWTVSVYASQLK 243

Query: 225 DVYQQQYLQLSHSQPVG-DWTLGANLGYFHGDEDGSERAGQLDNKTYSGMFSAKYGGSTF 283
           DV+ Q Y   S   P+  D  L     Y+   ++G +R G+ DN  +S     +YG  T 
Sbjct: 244 DVWNQYYAGTSVVYPLSDDLALIGGFNYYKAVDEGKKRLGEFDNNIWSAKVGVRYGAHTL 303

Query: 284 WVGLQKVDGDTWMRVNGTSGGTLANDSYN-SSFDNANERSWQVRHDFNFVTVGVPGLTLM 342
            +  Q+ +GD        S     ++S   S F++  ERSW +R+D NF + G+PGLT M
Sbjct: 304 ALSHQRNNGDDDFDYLRQSDSIFVDNSIQYSDFNSPKERSWMLRYDLNFTSYGIPGLTFM 363

Query: 343 NRYISG--------------RDVHSGGVTDGKEWVRETELAYVIQSGAFKDLSVKWRNSS 388
            RY  G               D +   + + K W R+ E+ YV+Q+G  KDLS + R ++
Sbjct: 364 TRYARGSGADYSNANQFYMRTDDNGNPLDNQKRWERDVEVKYVVQTGPAKDLSFRLRQAT 423

Query: 389 IRRDYSNNEFDENRLIFNYPLSLL 412
            R     ++ DE R+I  YPLS+L
Sbjct: 424 TRATAFESDLDETRVIIEYPLSIL 447