Pairwise Alignments

Query, 298 a.a., putative inner membrane protein from Pseudomonas putida KT2440

Subject, 281 a.a., Inner membrane protein YfdC from Alteromonas macleodii MIT1002

 Score =  188 bits (477), Expect = 1e-52
 Identities = 96/269 (35%), Positives = 164/269 (60%), Gaps = 1/269 (0%)

Query: 3   NGQSEKTPGLSADEEQEVSHSQPPRAAVLHEIIRYQGDQELERTLAALWWSALAAGLSMG 62
           +G  E+   LS  EE++V  +Q   +  L+ I+  +G +EL+R + +LWWS +AAG+ + 
Sbjct: 8   SGHREQDVALSHTEEKDVRDNQSLNSVSLYAIVHREGLEELQRPMMSLWWSGVAAGIGIS 67

Query: 63  LSLMAMGLFYARLPEGAGAQVVASIGYSAGFLAVILARQQLFTENTLTAVLPVMTAPTLA 122
           +S++A G+ +          V+ ++GY+ GF+ VI+ R QLFTENTL+ +LP+++ P++ 
Sbjct: 68  ISILAEGILHHLFANSPNQFVIENLGYTVGFVLVIVGRLQLFTENTLSVILPLLSKPSVN 127

Query: 123 NFGRLLRLWGVVLLGNLAGTLLVAWVMLELPIFDSKTDVAFLEVGRKVMKNDISQMFAKG 182
               + RLWG+V   N+ GT L A+    L     +       +     K   S  F+ G
Sbjct: 128 MGVCIARLWGIVFAANMFGTFLAAFFSFSLQSVPPELVEGMTAISEHYAKLSPSDAFSYG 187

Query: 183 IVSGWMIATMVWMIPSMEHAKIWIILMITYLMALGDFTHIVVGSVEVSYLVWAGDETWSR 242
           I+SG++IA +VWM PS++H++I +I++ TYL+A+G+FTH++ GS E+ +L+   ++    
Sbjct: 188 IISGFIIAAIVWMKPSVKHSQILMIVIFTYLIAIGNFTHVIAGSTEL-FLLALQNKISVL 246

Query: 243 FWLEFALPTLAGNIIGGSFIFALISHAQV 271
             L     TL GNI+GG+ +FAL+++ QV
Sbjct: 247 ETLSLIGATLLGNIVGGTGLFALLAYGQV 275