Pairwise Alignments

Query, 861 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 1098 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  342 bits (878), Expect = 5e-98
 Identities = 221/577 (38%), Positives = 315/577 (54%), Gaps = 43/577 (7%)

Query: 296  QQSNQALEASEQRFRAVAESASDWIWETDRQQ-RLTYLSQRFANVTGYPVDGWLGHPLNQ 354
            Q+S  AL+ASE++F     S+ D I  T+R   R   ++  F  +TGY  +  +G  L Q
Sbjct: 526  QRSEAALKASEEKFAKAFHSSPDAISITERDTGRYVEVNDGFCRLTGYRAEEAIGLTLYQ 585

Query: 355  LLACDTTPLSPWLD----ALTAAEPQ---QLANLRCTYRDQNGQNRYCRISARAIWRDGK 407
            +          W D    A   AE Q   ++  L   + ++ G+     +S   I  +  
Sbjct: 586  I--------GIWADENQRAALLAELQIKGRINYLEMLWHNKRGELLAVEVSVEPITLNET 637

Query: 408  AIGFRGTASDITDEVDAHARIQHLSLHDPLTGLANRNKLARHLEQAL-------LRGSDS 460
                  TA D++   +A A+I+HL+ HDPLT L NR  L   L Q +       LRG+  
Sbjct: 638  PCLLL-TARDVSLLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGA-- 694

Query: 461  PPLTLLLLDLDNFKPINDSLGHAAGDAVLQEVATRLRDTTRDGDLVARLGGDEFILVLSG 520
                LL LDLD+FK INDSLGH  GD VL+ V  RL  + R  D VARLGGDEF+++LSG
Sbjct: 695  ----LLFLDLDHFKHINDSLGHPVGDTVLKIVTARLEASVRMEDTVARLGGDEFVVLLSG 750

Query: 521  MDN-----SSEIDRFCARLIGLLQQPIVFENQPLHIGASIGVAQTRNQGFDAGELIRCAD 575
            +D      S+++      L  LL +P+  +   L +  SIGVA   + G    +L++ AD
Sbjct: 751  LDGTRTEVSNQVQELADTLRELLSEPMFLDGHRLQVTPSIGVALIPDHGSTPADLLKRAD 810

Query: 576  IALYQAKADGKNTWRYFVAEMNQQIQYRRQLENDLRRALRNEEFELHYQPRYRLDDLRIV 635
            IALY+AK  G+NT + F   M +    R ++E DLR AL   EF +HYQP+      RIV
Sbjct: 811  IALYRAKDSGRNTTQMFHNSMQKTASERLRMETDLRLALSRGEFSVHYQPQVDARGNRIV 870

Query: 636  AVEALVRWRHPQEGLLAPDTFIPLAEQSDIIVALGRWVLREACRTAHDWPADVLVS---- 691
              EALVRW+HPQ G  +P  FI + E S +I+ +G W+L EAC       A+ LV     
Sbjct: 871  GAEALVRWQHPQLGAQSPSEFIKVLEDSGLILEVGTWILDEACAAFQQLIAEGLVDPLNF 930

Query: 692  ---VNLSPAQFLRSDVVADVRETLLDTAFPAQRLELEITENVMLNDIEGALGTMLSLKEL 748
               VN+SP QF ++D V  V  +L     P   L+LEITE +++ +++  +  M  LK+L
Sbjct: 931  SLCVNISPRQFRQNDFVERVERSLKQHKLPFSLLKLEITEGIVIQNLDDTISKMRRLKKL 990

Query: 749  GVRLNMDDFGTGYSSLGYLRTYPFDSIKIDKRFISGLNNNGGSDRAVVQAIINLGEAMGL 808
            GV   MDDFGTGYSSL YL+  P D++KID+ F+    ++  +D  +++AI+ +  ++ L
Sbjct: 991  GVSFAMDDFGTGYSSLTYLKRLPVDALKIDQSFVRDATHD-PNDAEIIRAIVAMARSLNL 1049

Query: 809  TVTAEGVESEHQLKSLEKDRCHEVQGYYLSKPLDSAG 845
             V AEGVE++ QL  L+   CH  QGY  S+PL   G
Sbjct: 1050 EVIAEGVETQDQLAFLQGLGCHLYQGYLHSRPLPMIG 1086



 Score = 37.4 bits (85), Expect = 5e-06
 Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 5/137 (3%)

Query: 296 QQSNQALEASEQRFRAVAESASDWIWETDRQQRLTYLSQRFANVTGYPVDGWLGHPLNQL 355
           + + QAL+ S++R     +SA    W+      + Y S R A + G P + +        
Sbjct: 272 KNAEQALKDSQERLDLALDSAQLGTWDWHIPTGMLYGSARAAQLHGLPPEPFHESFDAFF 331

Query: 356 LACDTTPLSPWLDALTAAEPQQLANLRCTYR--DQNGQNRYCRISARAIWRD--GKAIGF 411
                       +A          N + TYR   ++G +RY    AR ++RD  G  +  
Sbjct: 332 EGMPDDERESMRNAYRTLREGPAGNYQLTYRVPMEDGSSRYLESRAR-LYRDEQGAPLRM 390

Query: 412 RGTASDITDEVDAHARI 428
            GT  DITD+V+   R+
Sbjct: 391 AGTLLDITDQVEREQRL 407