Pairwise Alignments

Query, 662 a.a., putative Membrane protein from Pseudomonas putida KT2440

Subject, 695 a.a., putative efflux transporter from Pseudomonas putida KT2440

 Score =  167 bits (424), Expect = 1e-45
 Identities = 174/668 (26%), Positives = 262/668 (39%), Gaps = 62/668 (9%)

Query: 18  FAIKTLLGGGLALWLAMRWGLEQPSWALMTAFIVAQPLSGMVVQKGLARLAGTLVGTVMS 77
           + ++T     +AL++A+   L +P WA+ T +IV+ P  G    K L R  GTL+G   +
Sbjct: 16  YGVRTFGASMIALYIALLMQLPRPYWAMATVYIVSSPFVGPTSSKALYRAVGTLLGAGGA 75

Query: 78  VLFIGLFAQTPGLFLLTLALWLALCTAASTQLRSAWAYAFVLAGYTAAIIALPAIDHPLQ 137
           +  +    Q+P L  + +ALW       S  LR+A  Y  +LAGYT  +IAL  +D+PL 
Sbjct: 76  IFLVPPLVQSPLLLSIAVALWTGTLLFLSLNLRTANNYVLMLAGYTLPMIALAVVDNPLA 135

Query: 138 VFDQAVARCTEICLGIFCATASSALLWPMRVEQQLGGQARQAWQNGLQAASAMLGGEDEA 197
           VFD A +R  EICLGI CA    A+ WP R+   + G     +   ++ +   L  +  A
Sbjct: 136 VFDVASSRAQEICLGIVCAAVVGAIFWPRRLAPVVVGATGNWFNEAIRYSDTYLARDASA 195

Query: 198 ------RKGLLESLGRIVAIDSQREHAWFEGNRGRQRARAIRG-----------LSQKLM 240
                 R  ++ +   +  +  Q  H    G    + AR +RG           L   L+
Sbjct: 196 DKVGGMRGAMVTTFNSLELMIGQLAHEG-AGPHTLKNARELRGRMIHLLPVIDALDDALV 254

Query: 241 VL----------LRISRSVRRQWRQ--LDEGEVEHLTPWLQEVRTL---LAQPDQPSLLL 285
            L          L+      R+W +   D   V H     +++  L    A  DQ + LL
Sbjct: 255 ALEGRAPAQFAQLQPVLEAAREWLKGTADSASVAHWATLHEQIGRLQPATAALDQRAELL 314

Query: 286 LRQRIWDAAHDEQISSAEHFCLARMALLLDYAMAASQALEDVEAGRAPKDVSQGLAAHRD 345
           L   ++     E     +  C  + AL  D A            GR        L A  D
Sbjct: 315 LSNALYRLT--EWADLWQDCCTLQHALRTDDAKPWRAVYRHWRLGR--------LTAFFD 364

Query: 346 WSLALLFGSRSALAFLVMSGFWLATAWPSAPGGLVLTCVVCSLFASRENGAQIGLSFLRG 405
             L L   + + LA +V  G W+   W      ++L  V CS FA+ ++ A     F   
Sbjct: 365 RGLMLYSVASTVLAIVVACGLWIGLGWNDGASAVILAAVACSFFAAMDDPAPQIYRFFFW 424

Query: 406 IFLAIPAAFVVGQIMLPQWSSFAMLCLGMGVPLFLGALGMAHPRTGATATSYCLHFIVLV 465
             +++  + +   ++LP    F ML L   VP          PR         ++    +
Sbjct: 425 TLMSVIFSSLYLFLVLPNLHDFPMLVLAFAVPFICIGTLTVQPRFYLGTLLTIVNTSTFI 484

Query: 466 SPLNAMQFGVATMLNSALAMLVGVSAAVMAFRLLVFRHPAWL---GRRLRAATQNDLVRL 522
           S   A      T LNS LA   G +  + AF   +   P  +    +R+      D+V +
Sbjct: 485 SIQGAYDADFFTFLNSNLA---GPAGLLFAFIWTLVMRPFGVELAAKRMTRFAWRDIVEM 541

Query: 523 TRRDLRGADSWFGGRMADRLMQLARHASELPEGERKRWDDGLHGLDIGDELVHLRMCLAV 582
           T           G +M DRLMQ     S+  +       D   GL++ D L ++      
Sbjct: 542 TEPATLAEHRQVGVQMLDRLMQHLPRLSQTGQDSGVALRDLRVGLNLLDLLAYMPRAGQQ 601

Query: 583 AQAPLGRAEREYLQHVEAALAKG-----PAA-----GRGQL---LDAASEQFIAALRRLP 629
           A+  L     E   H  A L  G     PAA      R +L   LD   E+  A    L 
Sbjct: 602 ARERLNTVVEEVGAHYAACLRAGERLHAPAALLRNMERARLALNLDELYERGDARTHLLH 661

Query: 630 ASDPLRLA 637
           A   LRLA
Sbjct: 662 ALSGLRLA 669