Pairwise Alignments

Query, 948 a.a., RNA polymerase-associated protein RapA from Pseudomonas putida KT2440

Subject, 463 a.a., ATP-dependent RNA helicase Atu1833 from Sphingobium sp. HT1-2

 Score = 44.3 bits (103), Expect = 2e-08
 Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 3/97 (3%)

Query: 490 LVICAHAETAMDLEDALRVRSGIPASVFHEGMSILERDRAAAYFADEEFGAQVLICSEIG 549
           ++ C    T  +L  +L+ R G  +   H  +    R      F D      +L+ S++ 
Sbjct: 246 VIFCNRKTTVRELNKSLQ-RHGFKSGEIHGDIDQASRIAELERFRDGS--VNILVASDVA 302

Query: 550 SEGRNFQFAHHLVMFDLPAHPDLLEQRIGRLDRIGQK 586
           + G + +   H+  FD P HPD    RIGR  R G K
Sbjct: 303 ARGLDIKGVSHVFNFDAPWHPDDYVHRIGRTGRAGAK 339