Pairwise Alignments

Query, 754 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 694 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score =  335 bits (859), Expect = 5e-96
 Identities = 211/658 (32%), Positives = 350/658 (53%), Gaps = 41/658 (6%)

Query: 62  WNMLGACCLAGGIWAMHFISMLAFRAPVDVHYDVSLTILSLLIALGVAWLAMHSLERSNM 121
           W  L        IW  HF++ML + A  DV YD  LT LSLLIA+     A   +     
Sbjct: 49  WLFLAGVNGGAAIWTTHFVAMLGYVAAGDVGYDPYLTGLSLLIAITTT-TAGFGISAYGG 107

Query: 122 RAHYFVPSAGLIGLGIILMHFVGMAAMETGARQYYQTGLLLASAAIALLTALTALYLARY 181
           R+        ++GLGI  MH+ GMAA       ++    ++AS  + L + L A+ + R 
Sbjct: 108 RSVLVEAGGTILGLGIAAMHYTGMAAYNVQGMIFWDQAYVIAS--LVLGSVLGAIAVNRI 165

Query: 182 LRNGSGTLYQAMKYGASLLMAGGIVATHFTAMSAMTLVIPADTALRLPSGDNSLQ---LG 238
            R     L +  +Y A   +   I + H+T M++M+     D  + +P  +N L    +G
Sbjct: 166 AR----PLNRFCQYSAVAFLILAIASMHYTGMASMSFAF--DPRIIIP--ENLLPPAIMG 217

Query: 239 LGIGFITLLISGASISAALADKKLQSKEHDLRRVSVLLSQLDQARASLQQAAHYDALTNL 298
            G   +TLL+    +S  + D +                   QA A  +  + +D LT +
Sbjct: 218 GGAIAVTLLLLALGLSTYVIDAQ----------------STQQAVARYRHLSLHDPLTGI 261

Query: 299 LNRRGFNQVFAERLVEHQASENRLAVMFLDIDHFKRINDSLGHDAGDELLKVIANHIKAA 358
            NR  F +    R   H +     A++ +D+D FK IND  GH AGD +L+ IA+   + 
Sbjct: 262 PNRAAFIE-HLNRRTRHISMGAHTALLSIDLDRFKEINDVHGHAAGDAVLRAIADRASSV 320

Query: 359 TRNHDLVARFGGDEFCVVT-SLNSRDEARHLAQRIMQRMKDPIDLGGRRMVMTTSIGISI 417
            +  + +AR GGDEF  +T S  +R +    AQR+++++  P++  G+   +  S+GIS+
Sbjct: 321 LKAGEFLARMGGDEFVAMTHSYYTRADGAEFAQRLIEQISKPVEWNGQTFSVGASVGISV 380

Query: 418 FPDDGSTAEELLKHADLALYQSKDNGRNSLNFFNDSLK--ARASIALQLEEELRLALLEE 475
                  A+ L+  AD+A+Y++K    +++ F++ S+   ARA  AL +     LA  E 
Sbjct: 381 RNTGSIDADTLMAQADVAMYRAKSATSDTICFYDKSMDEAARARNALAIAMRSGLANNEF 440

Query: 476 RGLCVHYQPIFDLRSGQVAKLEALVRWQHPQHGLLGPDRFVGIAEANGLIIDLDLWVLRH 535
               ++YQ   D +SG +   EAL+RW+HP+ G++ P  F+ IAE  G I++L  WVLR 
Sbjct: 441 E---LYYQQQNDTKSGSIVGFEALLRWKHPERGMVSPVEFIPIAEQTGFIVELGEWVLRE 497

Query: 536 ACADLAHLQRHGYGEVQVTVNCSAVTLSHDELPNEVEKALFHAGLAPRHLELEVTENALV 595
           ACA  A  ++     + + VN +   L+ ++ P++VE+ L   GLAP  LELE+TE +++
Sbjct: 498 ACAQAARWKK----SLAIAVNVAPQQLADNDFPDKVERILAETGLAPERLELEITEGSII 553

Query: 596 GDIQRTVSLLKRVRALGVALSIDDFGTGYSSLAYLKRLPLDVLKIDRTFLQDVPGSQKDR 655
            D +  +  ++++++LGV +++DD+GTGYSSL+ L+  P D +KIDR F+  +  + +  
Sbjct: 554 ADHRHALVTIRKLKSLGVKIAMDDYGTGYSSLSTLQSFPFDKIKIDRAFIDGLSTNVQSE 613

Query: 656 EIVQAIIAMAHTLHLRVVSEGVETAEQQAFLESHGCDYLQGYLLGRPVPLAELRPLLE 713
            IV++ + +AH+L++ V++EGVET     FL   GC  +QG+  G+P PL  +  L++
Sbjct: 614 AIVRSTLILAHSLNIPVLAEGVETKAHIEFLRREGCLQVQGFFFGKPGPLTSIANLVD 671