Pairwise Alignments

Query, 371 a.a., branched-chain amino acids ABC transporter - periplasmic leucine binding subunit from Pseudomonas putida KT2440

Subject, 409 a.a., Leu/Ile/Val-binding protein from Xanthobacter sp. DMC5

 Score =  110 bits (274), Expect = 9e-29
 Identities = 94/349 (26%), Positives = 150/349 (42%), Gaps = 21/349 (6%)

Query: 1   MIKISKLFAAMVLA---GVASHSFAADTIKIGIAGPKTGPVTQYGDMQFIGAKQAIKDIN 57
           M   + L AAM+ A    VA  + A  T+K G   P +G +   GD  F G + A+++ N
Sbjct: 3   MFARAALAAAMLAAVPLAVAQPAAAQGTVKFGALYPFSGTLALLGDESFRGFELAVEERN 62

Query: 58  AAGGVDGKMLEAKEYDDACDPKQAVAVANKVVN-DGVKFVVGHLCSSSTQPASDIYEDEG 116
           AAGG++G+ +E  +  DA DP QAV  A ++ + D V  + G   SS +  A+ + E   
Sbjct: 63  AAGGLNGQKIEFIK-GDAVDPNQAVGEARRLTSVDKVSAIFGTYSSSLSLAATQVTELAN 121

Query: 117 VIMITPAATSPEITARGYKLIFRTIGLDSAQGPAAGNYIADHVKPKV--------VAVLH 168
           V      A S  IT RG+K +FRT            + I + + P +        + ++H
Sbjct: 122 VPYFELGAISDPITERGFKYVFRTNATARDFANRMVDSIIEAIAPALNAKPGDLKIGIIH 181

Query: 169 DKQQYGEGIATAVKQTLESKGTKVAVFEGLNAGDKDFSSIIQKLKQNNVDFVYYGGYHPE 228
           +   YG+ ++   K   + KG  V      +A   D + +I +LK    D V    Y  +
Sbjct: 182 EDSLYGQTVSGYQKSRAKEKGLNVVEVLPYSAKSVDLTPVILRLKSAGADVVLQTSYQND 241

Query: 229 LGLILRQAQEKGLKAKFMGPEGVG---NDSISQIAQNASEGLLVTLPKSFDADPANKKIV 285
             L  RQ +++G K K +   G G    D++  +     EG L      ++ +P     +
Sbjct: 242 TVLFFRQMKDQGYKPKAVMGAGGGYSTRDTMQAVGAENMEGALDVDFTQYNTNPKAAPGI 301

Query: 286 DAIKAD-----GKDPSGPFVFPAYSAVELIAQGIKKAGSDDTDKVAEAI 329
               A      G +P        Y   ++    I  A S D DKV  A+
Sbjct: 302 TEFAAKYKAKYGIEPRSGHSLANYMGAKVFFDAIASAKSTDADKVRAAV 350