Pairwise Alignments

Query, 371 a.a., branched-chain amino acids ABC transporter - periplasmic leucine binding subunit from Pseudomonas putida KT2440

Subject, 406 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Xanthobacter sp. DMC5

 Score =  111 bits (278), Expect = 3e-29
 Identities = 97/342 (28%), Positives = 155/342 (45%), Gaps = 19/342 (5%)

Query: 4   ISKLFAAMVLAGVA--SHSFAADTIKIGIAGPKTGPVTQYGDMQFIGAKQAIKDINAAGG 61
           ++ L A + + G+A    ++AAD IKIG+ GP TG  +  G     G K A+ ++N AGG
Sbjct: 7   VAALAAGVAVFGLAFSGAAYAADPIKIGLTGPFTGGSSSMGVSMRDGVKLAVDEVNKAGG 66

Query: 62  VDGKMLEAKEYDDACDPKQAVAVANKVVN-DGVKFVVGHLCSSSTQPASDIYEDEGVIMI 120
           V G+ L+  E DD    +  V +A +++N +GV   +G++ +     +   Y++  + +I
Sbjct: 67  VLGRPLQLIERDDEAKNEVGVQIAQELINKEGVVATLGYINTGVALASQRFYQEAEIPVI 126

Query: 121 TPAATSPEITAR------GYKLIFRTIGLDSAQGPAAGNYIADHVKPKVVAVLHDKQQYG 174
              AT   I+ +          IFRT   D+ Q     +        K  A+L D   YG
Sbjct: 127 NNVATGTLISKQFVPPDNKNNYIFRTSANDAIQSAMIADEAVKRQGFKKPAILADSTNYG 186

Query: 175 E-GIATAVKQTLESKGTKVAVFEGLNAGDKDFSSIIQKLKQNNVDFVYYGGYHPELGLIL 233
           + G A  VK  L + G K    E  N GD D ++ + + K+   D +      PEL  I 
Sbjct: 187 QLGRADLVK-ALATMGVKPVAEEKFNIGDTDMTAQLLRAKEAGADVILTYAIGPELAQIA 245

Query: 234 RQAQEKGLKAKFMGPEGVGNDSISQIAQNASEGLLVTLPKSF---DADPANKKIVDAIKA 290
               + G K   +G   +   +    A     G +  +P++F      P  K  ++A +A
Sbjct: 246 NGMAKLGWKVPMIGSWTLSMANFIDTAGANGNGAM--MPQTFIQLPDTPKRKAFIEAYQA 303

Query: 291 DGK---DPSGPFVFPAYSAVELIAQGIKKAGSDDTDKVAEAI 329
             K    PS       Y +V L+A  IK+AGS D  KV +A+
Sbjct: 304 AYKIDRMPSPVSAAQGYDSVLLLAAAIKQAGSTDGRKVRDAL 345