Pairwise Alignments

Query, 371 a.a., branched-chain amino acids ABC transporter - periplasmic leucine binding subunit from Pseudomonas putida KT2440

Subject, 380 a.a., Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  172 bits (435), Expect = 2e-47
 Identities = 114/350 (32%), Positives = 177/350 (50%), Gaps = 18/350 (5%)

Query: 26  IKIGIAGPKTGPVTQYGDMQFIGAKQAIKDINAAG-GVDGKML--EAKEYDDACDPKQAV 82
           +KIG +GP +GP    G     G + AI+++NA    V GK L  E    DD CD K  V
Sbjct: 32  VKIGHSGPLSGPNAFAGKDNENGVRLAIEELNAKKLMVGGKTLKFELVSEDDQCDAKTGV 91

Query: 83  AVANKVVNDGVKFVVGHLCSSSTQPASDIYEDEGVIMITPAATSPEITARGYKLIFRTIG 142
           +VA K V+DGVKFV+G  CS    PAS IY D GV++ T   T+P++T  GYK ++R I 
Sbjct: 92  SVAQKFVDDGVKFVMGPYCSGVAIPASRIYSDGGVLLST-VGTNPKVTQGGYKNLYRIIA 150

Query: 143 LDSAQGPAAGNYIADHVKPKVVAVLHDKQQYGEGIATAVKQTLESKGTKVAVFEGLNAGD 202
            D+  G A   Y A  +K K V V+ D+  +G+G+A    +  +++G  V   E      
Sbjct: 151 SDNQIGGAMAVYAAKVLKVKKVGVIDDRTAFGQGLAEEFTKEAKTQGLTVVGQEFTTDKA 210

Query: 203 KDFSSIIQKLKQNNVDFVYYGGYHPELGLILRQAQEKGLKAKFMGPEGV--------GND 254
            DF++I+  +K  + + +++GGY P+   + RQ ++  +  K +G + V        G D
Sbjct: 211 VDFTAILTNMKAKSPEAIFFGGYAPQAAPMARQMKQLAVAGKLLGGDTVCSPATGKLGGD 270

Query: 255 SISQIAQNASEGLLVTLPKSFDADPANKKIVDAIKADGKDPSGPFVFPAYSAVELIAQGI 314
           +++ +   A  G ++   +S  A     K    I AD       +    Y  V  I + +
Sbjct: 271 AVNDVVFCAQGGSILEKAQSGPAFKEKFKKRFNIDADA------YAASYYDQVMFIGESM 324

Query: 315 KKAGSDDTDKVAEAIHKGTFKTPTGDLSFDDKGDLKDFKFVVYEWHFGKP 364
           KKA S D DKV   ++K T+K      ++DDKG++K     V+ +    P
Sbjct: 325 KKANSVDPDKVGAELYKTTYKGVAATYAYDDKGNMKQAPITVFTFKNAAP 374