Pairwise Alignments

Query, 371 a.a., branched-chain amino acids ABC transporter - periplasmic leucine binding subunit from Pseudomonas putida KT2440

Subject, 367 a.a., branched chain amino acid ABC transporter substrate-binding protein LivJ from Escherichia coli ECRC101

 Score =  430 bits (1106), Expect = e-125
 Identities = 207/360 (57%), Positives = 274/360 (76%), Gaps = 6/360 (1%)

Query: 12  VLAGVASHSFA----ADTIKIGIAGPKTGPVTQYGDMQFIGAKQAIKDINAAGGVDGKML 67
           +LAG  + +F+    A+ IK+ + G  +GPV QYGD +F GA+QA+ DINA GG+ G  L
Sbjct: 8   LLAGCIALAFSNMALAEDIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGNKL 67

Query: 68  EAKEYDDACDPKQAVAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDEGVIMITPAATSP 127
           +  +YDDACDPKQAVAVANKVVNDG+K+V+GHLCSSSTQPASDIYEDEG++MITPAAT+P
Sbjct: 68  QIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMITPAATAP 127

Query: 128 EITARGYKLIFRTIGLDSAQGPAAGNYIADHVKPKVVAVLHDKQQYGEGIATAVKQTLES 187
           E+TARGY+LI RT GLDS QGP A  YI + VKP+ +A++HDKQQYGEG+A AV+  L+ 
Sbjct: 128 ELTARGYQLILRTTGLDSDQGPTAAKYILEKVKPQRIAIVHDKQQYGEGLARAVQDGLKK 187

Query: 188 KGTKVAVFEGLNAGDKDFSSIIQKLKQNNVDFVYYGGYHPELGLILRQAQEKGLKAKFMG 247
               V  F+G+ AG+KDFS+++ +LK+ N+DFVYYGGYHPE+G ILRQA+  GLK +FMG
Sbjct: 188 GNANVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGLKTQFMG 247

Query: 248 PEGVGNDSISQIAQNASEGLLVTLPKSFDADPANKKIVDAIKADGKDPSGPFVFPAYSAV 307
           PEGV N S+S IA  ++EGLLVT PK++D  PANK IVDAIKA  +DPSG FV+  Y+A+
Sbjct: 248 PEGVANVSLSNIAGESAEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFVWTTYAAL 307

Query: 308 ELIAQGIKKAGSDDTDKVAEAIHKGTFKTPTGDLSFDDKGDLKDFKFVVYEWHFGKPKTE 367
           + +  G+ +  SDD  ++A+ +   +  T  G L++D+KGDLK F+F V++WH     T+
Sbjct: 308 QSLQAGLNQ--SDDPAEIAKYLKANSVDTVMGPLTWDEKGDLKGFEFGVFDWHANGTATD 365