Pairwise Alignments

Query, 371 a.a., branched-chain amino acids ABC transporter - periplasmic leucine binding subunit from Pseudomonas putida KT2440

Subject, 372 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

 Score =  309 bits (792), Expect = 7e-89
 Identities = 163/361 (45%), Positives = 228/361 (63%), Gaps = 1/361 (0%)

Query: 2   IKISKLFAAMVLAGVASHSFAADTIKIGIAGPKTGPVTQYGDMQFIGAKQAIKDINAAGG 61
           +K S L A  + A VA    A   + I +  P TGP   +G     GA+QA KDINAAGG
Sbjct: 1   MKKSLLSAVALTAMVAFGGSAWADVVIAVGAPLTGPNAAFGAQIQKGAEQAAKDINAAGG 60

Query: 62  VDGKMLEAKEYDDACDPKQAVAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDEGVIMIT 121
           ++G+ ++    DD  DPKQ ++VANK V DGVKFVVGH  S  + PAS++Y + G++ IT
Sbjct: 61  INGEQIKIVLGDDVSDPKQGISVANKFVADGVKFVVGHFNSGVSIPASEVYAENGILEIT 120

Query: 122 PAATSPEITARGYKLIFRTIGLDSAQGPAAGNYIADHVKPKVVAVLHDKQQYGEGIATAV 181
           PAAT+P  T RG    FRT G D  QG  AG Y+ADH K   VA++HDK  YG+G+A   
Sbjct: 121 PAATNPVFTERGLWNTFRTCGRDDQQGGIAGKYLADHFKDAKVAIIHDKTPYGQGLADET 180

Query: 182 KQTLESKGTKVAVFEGLNAGDKDFSSIIQKLKQNNVDFVYYGGYHPELGLILRQAQEKGL 241
           K+   + G    ++EG+N GDKDFS++I K+K+  V  +Y+GG H E GLI+RQA ++GL
Sbjct: 181 KKAANAAGVTEVMYEGVNVGDKDFSALISKMKEAGVSIIYWGGLHTEAGLIIRQAADQGL 240

Query: 242 KAKFMGPEGVGNDSISQIAQNASEGLLVTLPKSFDADPANKKIVDAIKADGKDPSGPFVF 301
           KAK +  +G+ ++ ++ IA +A EG L T        P NK++V+  KA G +P   +  
Sbjct: 241 KAKLVSGDGIVSNELASIAGDAVEGTLNTFGPDPTLRPENKELVEKFKAAGFNPEA-YTL 299

Query: 302 PAYSAVELIAQGIKKAGSDDTDKVAEAIHKGTFKTPTGDLSFDDKGDLKDFKFVVYEWHF 361
            +Y+A++ IA   K AGS + +KVAEA+ KG+F T  G++SFD+KGD K   +V+YEW  
Sbjct: 300 YSYAAMQAIAGAAKAAGSVEPEKVAEALKKGSFPTALGEISFDEKGDPKLPGYVMYEWKK 359

Query: 362 G 362
           G
Sbjct: 360 G 360