Pairwise Alignments

Query, 371 a.a., branched-chain amino acids ABC transporter - periplasmic leucine binding subunit from Pseudomonas putida KT2440

Subject, 368 a.a., ABC transporter, substrate binding protein (branched chain amino acid) from Agrobacterium fabrum C58

 Score =  266 bits (679), Expect = 9e-76
 Identities = 140/364 (38%), Positives = 212/364 (58%), Gaps = 3/364 (0%)

Query: 2   IKISKLFAAMVLAGVASHSFAADTIKIGIAGPKTGPVTQYGDMQFIGAKQAIKDINAAGG 61
           +K+  L +  + A  A    A   I IG+  P TGPV  YGD    GA+ A+ +IN  GG
Sbjct: 1   MKLKTLTSVTLAASFAFAPLAHAEIVIGLIAPLTGPVAAYGDQVKNGAQTAVSEINKKGG 60

Query: 62  VDGKMLEAKEYDDACDPKQAVAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDEGVIMIT 121
           + G+ +  K  DD  +PKQ V+ AN++V +G+ FVVG + S    PASD++ + GV+M+T
Sbjct: 61  ILGEQVVLKLADDGGEPKQGVSAANQLVAEGIHFVVGPVTSGVAIPASDVFAENGVLMVT 120

Query: 122 PAATSPEITARGYKLIFRTIGLDSAQGPAAGNYIADHVKPKVVAVLHDKQQYGEGIATAV 181
           P AT+P +T RG   +FRT G D  Q   A  Y+  ++K K +A++HDK  YG+G+A + 
Sbjct: 121 PTATAPGLTNRGLSNVFRTCGRDDQQAEVAAKYVLANLKGKKIAIIHDKGAYGKGLADSF 180

Query: 182 KQTLESKGTKVAVFEGLNAGDKDFSSIIQKLKQNNVDFVYYGGYHPELGLILRQAQEKGL 241
           K TL + G    +++ L  G+KD  ++  +LK +N D VY+GGYHPE GL++RQ ++ G 
Sbjct: 181 KATLNAGGVTEVLYDALTPGEKDLGALTARLKSDNADIVYFGGYHPEAGLLVRQLKDIGS 240

Query: 242 KAKFMGPEGVGNDSISQIAQNASEGLLVTLPKSFDADPANKKIVDAIKADGKDPSGPFVF 301
           KA  +G +G+ N     I   A EG + T       +  +K   +A+KA    P+  F  
Sbjct: 241 KAAVIGGDGLSNSEFWNIGAKAGEGTIFTNASDALKNDDSKAAAEALKA-ANIPAEAFTL 299

Query: 302 PAYSAVELIAQGIKKAGS-DDTDKVAEAIHKG-TFKTPTGDLSFDDKGDLKDFKFVVYEW 359
            AY+AVE++  GI+KAGS  D++ VA+ +  G  F T  G +++ D GDL    F +++W
Sbjct: 300 NAYAAVEVLKAGIEKAGSAKDSEAVAKVLKSGEAFPTAIGKVTYGDNGDLTSQAFSLFKW 359

Query: 360 HFGK 363
             GK
Sbjct: 360 QDGK 363