Pairwise Alignments

Query, 418 a.a., branched chain amino acid transporter - permease subunit from Pseudomonas putida KT2440

Subject, 495 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  342 bits (878), Expect = 1e-98
 Identities = 210/454 (46%), Positives = 273/454 (60%), Gaps = 50/454 (11%)

Query: 5   LKQAFFSALLVWAVAFPVLGLKLSIDGISLVVHSQGSFTISIIAVCSVLMFLR-VLFDKQ 63
           LK A  S LL   +  P++G + S      +V +     ++I A   ++M  R +L    
Sbjct: 36  LKDALVSGLLTALLFLPLVGFRASESSTGSLVLTYRFGLVAIFA--GIVMVGRFLLMVTV 93

Query: 64  WSSVMGRRSDRKLIPPAVSNYLTLPKTQRYVIIGLIVVALVWPFFG---------SRGAV 114
           W+    R   R    P V   L    +     +     A+++PF           SR  V
Sbjct: 94  WNP--NRPPRRVSTTPGVMVRLGALASPAVKPV-FFSFAILYPFLSILLAGGLSPSRYWV 150

Query: 115 DIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAYSYAMLS--------------- 159
           D+   +L YV+LG GLNIVVGLAGLLDLGYV FYAVGAY++A+LS               
Sbjct: 151 DLGIYVLTYVMLGWGLNIVVGLAGLLDLGYVAFYAVGAYTFALLSTSVPINDFFAGTLGD 210

Query: 160 -HYLGWSFWVCLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRNLTDWT 218
             +  W+FW+CLP++G++AA +G +LGFPVLRLRGDYLAIVTL FGEIIRL L N    T
Sbjct: 211 DFWTAWAFWICLPLSGILAAMWGVILGFPVLRLRGDYLAIVTLAFGEIIRLVLINWVSLT 270

Query: 219 GGPNGISNIPKPEFFGLTFERRAAEGMQTFHEFFGLQYNSINKVIFLYLVALLLALLALF 278
            G  GIS+IP   FFG+ F+         F   FGL++NS++++ FLY V L LA L   
Sbjct: 271 NGGAGISSIPPITFFGVPFDSSETG----FASIFGLEFNSMHRMFFLYFVILGLAALTAV 326

Query: 279 VINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGACFAGFAGSFFAARQGLV 338
           V  RL +MP+GRAWEALREDEIACR+LG+N T+ KL+AF  GA F GFAG+FFA R   V
Sbjct: 327 VTIRLRKMPVGRAWEALREDEIACRSLGINTTLTKLTAFATGAMFGGFAGAFFAVRIRFV 386

Query: 339 TPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREF--------------- 383
           +PESFTF+ESA+ILAIVVLGGMGSQ+GV  AAI++I   EL+R                 
Sbjct: 387 SPESFTFMESAVILAIVVLGGMGSQMGVAGAAILLIGGMELLRNLSFLKADFLFGSDFDP 446

Query: 384 SEYRMLMFGALMVLMMIWRPQGLLPMQRPHMELR 417
           S YRML+FG  MV +M+WRP+GL+  + P + L+
Sbjct: 447 SLYRMLIFGFAMVAVMVWRPRGLVSSRMPTIFLK 480