Pairwise Alignments

Query, 418 a.a., branched chain amino acid transporter - permease subunit from Pseudomonas putida KT2440

Subject, 336 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  129 bits (325), Expect = 1e-34
 Identities = 91/329 (27%), Positives = 150/329 (45%), Gaps = 28/329 (8%)

Query: 83  NYLTLPKTQR-----YVIIGLIVVALVWPFFGSRGAVDIATLILIYVLLGLGLNIVVGLA 137
           N L   KTQ      +V+  LI + L+ P      +  +AT ILI+ +  L  N+++G  
Sbjct: 5   NPLPFAKTQSKAMLLWVLAVLIGLPLILP------SATLATEILIFAMAALACNLLLGYT 58

Query: 138 GLLDLGYVGFYAVGAYSYAMLSHYLGWSFWVCLPIAGLMAATFGFLLGFPVLRLRGDYLA 197
           GLL  G   F+  GAY  A+L  +L    +  L  A +       L+G   +R  G Y  
Sbjct: 59  GLLSFGQGIFFGAGAYCAALLMIHLQLGLFTALLGAAIAGGFLALLVGALAIRRTGIYFV 118

Query: 198 IVTLGFGEIIRLFLRNLTDWTGGPNGISNIPKPEFFGLTFERRAAEGMQTFHEFFGLQYN 257
           ++TL F ++       L+DWTGG NG+ ++P+PE        R  E +            
Sbjct: 119 MLTLAFSQMAYFVAYTLSDWTGGDNGLLSVPRPEI-------RLGETVLL---------- 161

Query: 258 SINKVIFLYLVALLLALLALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAF 317
           S+      Y    +L LL      R++  P G    A+RE+E    A+G +    K+  F
Sbjct: 162 SLADARAFYAFVAVLFLLIFIGARRVIASPFGSTLMAIRENETRASAIGYDTRHFKILVF 221

Query: 318 TLGACFAGFAGSFFAARQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLP 377
            L     G AG+ +A     V   +   + S  IL + ++GG GS  G +L A  ++LL 
Sbjct: 222 VLSGAVTGIAGALYAMLLHFVPLSNIDLMMSENILIMTIVGGTGSLFGSLLGAGSIVLLG 281

Query: 378 ELMREFSEYRMLMFGALMVLMMIWRPQGL 406
           + + +     +++ G +++L++I+   GL
Sbjct: 282 DFLSDLWPRWLMLLGVILILVVIFMRGGL 310