Pairwise Alignments

Query, 418 a.a., branched chain amino acid transporter - permease subunit from Pseudomonas putida KT2440

Subject, 402 a.a., Branched-chain amino acid ABC transporter, permease protein LivM (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  243 bits (619), Expect = 1e-68
 Identities = 151/349 (43%), Positives = 208/349 (59%), Gaps = 46/349 (13%)

Query: 95  IIGLIVVALVWPFFGSRGA--VDIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGA 152
           I+G I V  +      +G   V IA + L+YVLL LGLNIVVG AGLLDLGYV F+AVGA
Sbjct: 11  IVGAIAVLALPLLLQMQGNAWVRIADIALLYVLLALGLNIVVGYAGLLDLGYVAFFAVGA 70

Query: 153 YSYAM-----LSHYLGW-----------SFWVCLPIAGLMAATFGFLLGFPVLRLRGDYL 196
           Y +A+     L+    W           S  + +P+A ++A   G LLG P L+LRGDYL
Sbjct: 71  YLFALMGSSHLTETFPWFAQMFPNGMHTSLLIVIPLALVVAGCLGVLLGAPTLKLRGDYL 130

Query: 197 AIVTLGFGEIIRLFLRNL---TDWTGGPNGISNIPKPEFFGLTFERRAAEGMQTFHEFFG 253
           AIVTLGFGEIIR+FL NL    + T GP GI+ I   +F+GL   +          +F G
Sbjct: 131 AIVTLGFGEIIRVFLNNLDQPVNITNGPKGITAIDSIKFWGLDLGKA--------WKFDG 182

Query: 254 LQYNSINKVIFLYLVALLLALLALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIK 313
              +S++   +L+L    L +  + + +RL    IGRAW A+REDEIA +A+G+N   +K
Sbjct: 183 FTISSVSLYYYLFLA---LVVATVIISHRLQTSRIGRAWMAIREDEIAAKAMGINTRNMK 239

Query: 314 LSAFTLGACFAGFAGSFFAARQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVM 373
           L AF +GA F G +G+ FAA QG V+PESF+ +ES +I+A+VVLGG+G   GVIL A+++
Sbjct: 240 LLAFGMGASFGGVSGAMFAAFQGFVSPESFSLMESVMIVAMVVLGGIGHLPGVILGAVLL 299

Query: 374 ILLPELMR--------------EFSEYRMLMFGALMVLMMIWRPQGLLP 408
             LPE++R              + S  R L     M+++M+ RP+GL P
Sbjct: 300 AALPEVLRYVAGPLQAATDGRLDASILRQLFIALAMIVIMLLRPRGLWP 348