Pairwise Alignments

Query, 418 a.a., branched chain amino acid transporter - permease subunit from Pseudomonas putida KT2440

Subject, 354 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  128 bits (322), Expect = 2e-34
 Identities = 103/352 (29%), Positives = 157/352 (44%), Gaps = 45/352 (12%)

Query: 71  RSDRKLIPPAVSNYLTLPKTQRYVIIGLIVVALVWPFFGSRGAVDIATLILIYVLLGLGL 130
           R+D+++ P A      L      +++  +VV L    +  R    I T  LI  L  LGL
Sbjct: 14  RADQQIFPIAQDRIAILV----LLLVAFVVVPLGVSDYWMRA---ILTPFLILSLAALGL 66

Query: 131 NIVVGLAGLLDLGYVGFYAVGAYS-YAMLSHYLGWSFWVCLPIAGLMAATFGFLLGFPVL 189
           NI+VG  G + LG   F AVGAY+ Y       G      L + GL +   G L G P L
Sbjct: 67  NILVGYCGQISLGTGAFMAVGAYAAYNFQVRIDGMPLIASLLLGGLCSTVIGVLFGIPSL 126

Query: 190 RLRGDYLAIVTLGFGEIIR-LFLRNLTDWTGGPNGISNIPKPEFFGLTFERRAAEGMQTF 248
           R++G YLA+ TL         FLR         +G  ++     FG+  E          
Sbjct: 127 RIKGLYLAVATLAAQFFTDWAFLRIQWFTNNSSSGSVSVAGLNVFGVPIE---------- 176

Query: 249 HEFFGLQYNSINKVIFLYLVALLLALLALFVINRLLRMPIGRAWEALREDEIACRALGLN 308
                   + + K +F     ++ ALLA      L+R  IGR W A+R+ ++A   +G+ 
Sbjct: 177 --------SPVQKYLFCLAFVVVFALLA----KNLVRSAIGREWMAMRDMDVAAAVIGIR 224

Query: 309 PTVIKLSAFTLGACFAGFAGSFFA-ARQGLVTPESFTFIESAIILAIVVLGGMGSQLGVI 367
           P   KL+AF + +   G AG+ +     G   P +F+   S  +L +V++GG+GS +G  
Sbjct: 225 PVYAKLTAFAVSSFIVGVAGALWGFVHLGAWEPAAFSIDRSFQLLFMVIIGGLGSIMGSF 284

Query: 368 LAAIVMILLPELMREF-------------SEYRMLMFGALMVLMMIWRPQGL 406
             A  ++LLP  + +              S    ++FGAL+V  +I  P GL
Sbjct: 285 FGAAFIVLLPLFLNQLPAWLGFSISTALASHLETMIFGALIVFFLIVEPHGL 336