Pairwise Alignments

Query, 418 a.a., branched chain amino acid transporter - permease subunit from Pseudomonas putida KT2440

Subject, 600 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  159 bits (403), Expect = 2e-43
 Identities = 101/324 (31%), Positives = 166/324 (51%), Gaps = 26/324 (8%)

Query: 88  PKTQRYVIIGLIVVALVWP-FFGSRGAVDIATLILIYVLLGLGLNIVVGLAGLLDLGYVG 146
           P   R   +  ++ AL  P +F     + +AT   + +L+ +GLN++ G AG + LG+  
Sbjct: 17  PWAGRLGTVAAVLAALSLPLWFRGDFILFMATQAGVMMLVAIGLNLLTGYAGQVSLGHGA 76

Query: 147 FYAVGAYSYAMLSHYLGWSFWVCLPIAGLMAATF-GFLLGFPVLRLRGDYLAIVTLGFGE 205
             AVG+Y+ A+L     WSFW+   +AG+  +T  G ++  P LRL   Y A+VTL F +
Sbjct: 77  LVAVGSYTTALLMIDAHWSFWLAA-LAGMAVSTLAGLVMALPALRLSTWYFALVTLTFAQ 135

Query: 206 IIRLFLRNLTDWTGGPNGISNIPKPEFFGLTFERRAAEGMQTFHEFFGLQYNSINKVIFL 265
           ++   L      T G +G+  IP P           A G                  + +
Sbjct: 136 VVTDLLVEWRSLTRGFSGLVGIPPP-----------AIGAHVLGP------------VEV 172

Query: 266 YLVALLLALLALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGACFAG 325
           YL      +LA   +  L R   GR   A R++ +A  A G++   IKL AF + A  AG
Sbjct: 173 YLAVAACVVLAFLGVRNLSRSRYGRGMVAARDNPLAATASGVSLLRIKLFAFAVSAALAG 232

Query: 326 FAGSFFAARQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSE 385
            AG+F+A ++ ++TPE FT   S   L I+V+GG+G   G ++  +V  LLPEL+     
Sbjct: 233 LAGAFYAVQKTVITPEDFTADFSIFFLLIIVVGGLGRLWGPVVGTLVFFLLPELLGPLQS 292

Query: 386 YRMLMFGALMVLMMIWRPQGLLPM 409
           +R+L++G +++++M++ P G++ M
Sbjct: 293 WRLLIYGVVLLVLMVFAPHGIMGM 316