Pairwise Alignments

Query, 418 a.a., branched chain amino acid transporter - permease subunit from Pseudomonas putida KT2440

Subject, 346 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  159 bits (402), Expect = 1e-43
 Identities = 108/332 (32%), Positives = 166/332 (50%), Gaps = 39/332 (11%)

Query: 90  TQRYVIIGLIVVALVWPFFGSRGAVDIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYA 149
           T R  +   ++     P +GS   + +A ++ I+V+  LGLN+  G AGL+ L +  F  
Sbjct: 21  TSRTWMAAFVLSLFTLPLWGSDYVLAMACIVGIHVIAALGLNLTTGNAGLISLSHGAFIG 80

Query: 150 VGAYSYAMLSHYLGWSFWVCLPIAGLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRL 209
           VG Y+ A L    G  F++ LP+AG +AA  G ++G P LR++G YLAI TL    I+  
Sbjct: 81  VGCYTVAWLGKQ-GVPFYIALPVAGFVAAFLGVIVGLPSLRVKGLYLAIATLAAHFILSF 139

Query: 210 FLRNLTDWTGGPNGISNIPKPEFFGLTFERRAAEGMQTFHEFFGLQYNSINKVIFLYLVA 269
             R     TGG +G S IP+   FG               E  G + N        YL+ 
Sbjct: 140 AFREWDAVTGGVSGTS-IPRANLFGF--------------ELVGDRRN-------FYLIF 177

Query: 270 LLLALLALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGACFAGFAGS 329
           +    +A+   N L R  IGRA+ A+R+ +I+   LG++    KL+AF +GA +AG AG 
Sbjct: 178 VCAFAMAVAARN-LARTHIGRAFVAVRDRDISAEILGVHLLRTKLTAFAIGAFYAGVAGG 236

Query: 330 FFAARQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPELMREFSEYR-- 387
                 G +TP+ F    S   LA V++GG+G+ LG +L A+ M  +PE +R  +     
Sbjct: 237 LLGYFYGSITPDYFVLTLSVFYLAAVIVGGLGTVLGSVLGAVFMTFVPEGLRLLASVSSQ 296

Query: 388 -------------MLMFGALMVLMMIWRPQGL 406
                         ++FG L+++ +I+ P GL
Sbjct: 297 AFPGVAGLLLPMGQVVFGLLIIVFLIFEPHGL 328