Pairwise Alignments

Query, 418 a.a., branched chain amino acid transporter - permease subunit from Pseudomonas putida KT2440

Subject, 323 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  145 bits (367), Expect = 1e-39
 Identities = 101/305 (33%), Positives = 149/305 (48%), Gaps = 35/305 (11%)

Query: 114 VDIATLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAYSYAMLSHYLGWSFWVCLPIA 173
           V +ATL  IY LL LGL  + G  G+++LG VGFYAVGAY+ A+LS+  G    + L  A
Sbjct: 6   VFMATLAGIYALLSLGLVTIWGQGGMVNLGLVGFYAVGAYASALLSN-AGIPIGISLMCA 64

Query: 174 GLMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRNLTDWTGGPNGISNIPKPEFF 233
            LMA   G +L +    LRGDYLAIV+LGF E+IRL   N    TGG +G+S I  P   
Sbjct: 65  ALMAGAVGVVLSYLTRPLRGDYLAIVSLGFAEVIRLVATNEKWLTGGSDGLSGIRSP--- 121

Query: 234 GLTFERRAAEGMQTFHEFFGLQYNSINKVIFLYLVALLLALLALFVINRLLRMPIGRAWE 293
                                +  +I+   +L LV  ++A  A F + RL R P GRA  
Sbjct: 122 ------------------LKAELGAIHPWFYLLLVWAIVAAAA-FGLVRLFRSPYGRALR 162

Query: 294 ALREDEIACRALGLNPTVIKLSAFTLGACFAGFAGSFFAARQGLVTPESFTFIESAIILA 353
           A+R+DE      G     +KL  F +GA  +G AG  +A     + P+ F  + +  I  
Sbjct: 163 AVRDDEQVAAVAGKPVLQLKLKTFFVGAALSGLAGGIYAHLTSYIAPDGFVPLLTIYIFL 222

Query: 354 IVVLGGMGSQLGVILAAIVMILLPELMR------------EFSEYRMLMFGALMVLMMIW 401
               GG    +G +  ++ ++ L E  R            + +  R L+    ++++M  
Sbjct: 223 AATAGGYTRVVGALAGSLAVVALLESTRFIAAVIPGLTAVQVASLRELVIAVSLIVIMQL 282

Query: 402 RPQGL 406
           +P+G+
Sbjct: 283 KPEGV 287