Pairwise Alignments

Query, 418 a.a., branched chain amino acid transporter - permease subunit from Pseudomonas putida KT2440

Subject, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

 Score =  406 bits (1044), Expect = e-118
 Identities = 223/421 (52%), Positives = 285/421 (67%), Gaps = 11/421 (2%)

Query: 1   MNRNLKQAFFSALLVWAVAFPVLGLKLSIDGISLVVHSQGSFTISIIAVCSVLMFLRVLF 60
           + R+L +   + LL   V  PV+G+ L  DG +   +++      ++    V  FL  LF
Sbjct: 19  LKRSLLETIVAGLLALIVFGPVVGVVL--DGYTF--NAEPRRVAWLVGGVMVGRFLLSLF 74

Query: 61  DKQWSSVMGRRSDRKLIPPAVSNYLTLPKTQ---RYVIIGLIVVALVWPFFGSRGAVDIA 117
                +  G+R            ++T P  +   RY+I  LIV+A+V+P F ++  + + 
Sbjct: 75  ---LQTAPGQRMLLGFDSGGSGVHVTAPDYKSRLRYIIPALIVIAIVFPIFANKYLLTVV 131

Query: 118 TLILIYVLLGLGLNIVVGLAGLLDLGYVGFYAVGAYSYAMLSHYLGWSFWVCLPIAGLMA 177
            L LIYVLLGLGLNIVVGLAGLLDLGYV FYA+GAY  A+   YLG  FW  LP+A + A
Sbjct: 132 ILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWSVLPLAAIAA 191

Query: 178 ATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRNLTDWTGGPNGISNIPKPEFFGLTF 237
           A  G +LGFPVLR+ GDYLAIVTLGFGEIIRL L N   +TGGPNG+   P P FFGL F
Sbjct: 192 ALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGMP-APSPTFFGLEF 250

Query: 238 ERRAAEGMQTFHEFFGLQYNSINKVIFLYLVALLLALLALFVINRLLRMPIGRAWEALRE 297
            RRA +G    HEFFG +YN+  K +F+Y V  ++ L  L++ +RL RMP+GRAWEALRE
Sbjct: 251 GRRAKDGGVPIHEFFGFEYNASLKFVFIYAVLFMVVLAVLYIKHRLTRMPVGRAWEALRE 310

Query: 298 DEIACRALGLNPTVIKLSAFTLGACFAGFAGSFFAARQGLVTPESFTFIESAIILAIVVL 357
           DEIACR++GLN  ++KLSAFTLGA  AG AG FFA  QG V P SFTF ESA+ILAIVVL
Sbjct: 311 DEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFATYQGFVNPSSFTFFESALILAIVVL 370

Query: 358 GGMGSQLGVILAAIVMILLPELMREFSEYRMLMFGALMVLMMIWRPQGLLPMQRPHMELR 417
           GGMGS +GV++AA V+ + PEL+R FSEYR+L+FG LMVLMMIWRP+GL+ + R  +  R
Sbjct: 371 GGMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFGVLMVLMMIWRPRGLIRISRTGVTPR 430

Query: 418 R 418
           +
Sbjct: 431 K 431