Pairwise Alignments

Query, 397 a.a., Na(+)/H(+) antiporter NhaA 1 from Pseudomonas putida KT2440

Subject, 388 a.a., pH-dependent sodium/proton antiporter (NCBI) from Escherichia coli BW25113

 Score =  409 bits (1052), Expect = e-119
 Identities = 213/374 (56%), Positives = 270/374 (72%), Gaps = 2/374 (0%)

Query: 13  RFFQLEAASGLLLIAAAVLALIINNS-PLSYLYGGLLEVPVAVQVGALNIAKPLLLWIND 71
           RFF  +A+ G++LI AA+LA+I+ NS   S  Y   LE PV ++VG+L I K +LLWIND
Sbjct: 6   RFFSSDASGGIILIIAAILAMIMANSGATSGWYHDFLETPVQLRVGSLEINKNMLLWIND 65

Query: 72  GLMALFFLLIGLEVKREVVDGHLSKPSQVILPATAAVGGMVVPALIYWFINRDNPAAVAG 131
            LMA+FFLL+GLEVKRE++ G L+   Q   P  AA+GGM+VPAL+Y   N  +P    G
Sbjct: 66  ALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLYLAFNYADPITREG 125

Query: 132 WAIPTATDIAFALGVLALLGKRVPVSLKLFLMTLAIIDDLGAIIVIALFYSGTLSSVSLL 191
           WAIP ATDIAFALGVLALLG RVP++LK+FLM LAIIDDLGAII+IALFY+  LS  SL 
Sbjct: 126 WAIPAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYTNDLSMASLG 185

Query: 192 LAAACLLVLVAMNRLGVIKLGPYMIVGLILWVCVLKSGVHATLAGVALAFCIPLRTRNAE 251
           +AA  + VL  +N  G  + G Y++VG++LW  VLKSGVHATLAGV + F IPL+ ++  
Sbjct: 186 VAAVAIAVLAVLNLCGARRTGVYILVGVVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGR 245

Query: 252 SSPLLALEHALHPWVAYAILPIFAFANAGVSLAGMTVDSFTHPVPMGITIGLLLGKTVGV 311
            SP   LEH LHPWVAY ILP+FAFANAGVSL G+T+D  T  +P+GI  GLL+GK +G+
Sbjct: 246 -SPAKRLEHVLHPWVAYLILPLFAFANAGVSLQGVTLDGLTSILPLGIIAGLLIGKPLGI 304

Query: 312 FGLTWVAVKLRLAALPAGAGWGQILGVAILCGIGFTMSLFVGSLAFAPGSSEYAGMDRMG 371
               W+A++L+LA LP G  + QI+ V ILCGIGFTMS+F+ SLAF     E     ++G
Sbjct: 305 SLFCWLALRLKLAHLPEGTTYQQIMVVGILCGIGFTMSIFIASLAFGSVDPELINWAKLG 364

Query: 372 ILTGSFFAAVIGYA 385
           IL GS  +AVIGY+
Sbjct: 365 ILVGSISSAVIGYS 378