Pairwise Alignments

Query, 230 a.a., OmpA family protein from Pseudomonas putida KT2440

Subject, 257 a.a., cell envelope biogenesis protein OmpA from Pseudomonas simiae WCS417

 Score = 83.2 bits (204), Expect = 4e-21
 Identities = 76/246 (30%), Positives = 111/246 (45%), Gaps = 48/246 (19%)

Query: 5   RTALPLVLLTSVLTGCA------------------GLQKTDWPKCAAVGGVGGAALGAIE 46
           R  L +    ++L+GCA                  G+ KT   K   +G + GA  GA  
Sbjct: 5   RRLLVVATCVALLSGCASPNPYDGSSQGQASNESGGMSKT--AKYGGLGALAGALAGAAI 62

Query: 47  SSSWAGWGALLG----GGLAAGYCWAHGDGDEDGDGVPDSRDKCPGTPRGVQVDANGCPP 102
             +  G GAL+G    G  AAGY + + D  E        R+    T  GV+V   G   
Sbjct: 63  DHNNRGKGALIGAVVAGAGAAGYGY-YADQQEK-----KLRESMANT--GVEVQRQG--- 111

Query: 103 EPVAVVEEVVVQKEEVIVIRDVHFEFDSARLTASDKERLNTIATRLKQEAPSARLSVSGH 162
                       + ++I+  ++ F  +S  +++S    LN +A  LKQ   +  + + G+
Sbjct: 112 -----------DQIKLIMPGNITFATNSDAISSSFYLPLNNLANSLKQFNQNT-IQIVGY 159

Query: 163 TDSVGSDSYNQKLSERRAHSVTDYLVESGVPRSSFVSVVGAGETQPVADNATAEGRAMNR 222
           TDS GS   N  LS+RRA SV +YL   GV   + +S  GAG   P+A NA   GRA NR
Sbjct: 160 TDSTGSRQLNMDLSQRRAQSVANYLTSQGV-NGANLSARGAGPDNPIASNADVNGRAQNR 218

Query: 223 RTEIKI 228
           R E+ +
Sbjct: 219 RVEVNL 224