Pairwise Alignments

Query, 563 a.a., Recombinase-related protein from Pseudomonas putida KT2440

Subject, 541 a.a., putative Phage recombinase from Pseudomonas putida KT2440

 Score =  131 bits (330), Expect = 6e-35
 Identities = 121/412 (29%), Positives = 180/412 (43%), Gaps = 38/412 (9%)

Query: 4   VFSYIRFSSAKQSAGDSYARQVKAAKAFCDENGLEMADPREYLFFDKGRSAFKGKHLDDT 63
           V+SY+RFS  +Q+AG+S  RQ + AK++    GL + +       D+G SAF  +H+   
Sbjct: 8   VYSYLRFSDPRQAAGNSADRQAEYAKSWAAARGLTLDESLSLR--DEGLSAFHQRHIKQ- 64

Query: 64  GELARFLSYVEDSTIPPGSYLVVESLDRLSREKVRDALPRFLDLLAKGINVYTSVDKRLY 123
           G L  FL  V++  IP GS LVVE LDRLSR +   A  +   ++  GI V T+ D R Y
Sbjct: 65  GALGVFLQAVDEGRIPAGSVLVVEGLDRLSRAEPIQAQAQLAQIINAGITVVTASDGREY 124

Query: 124 TKD---YNELDLIISIISMSRAHEESAVKGGRVSSAWR---EKQKAARTTGKPLGKLRPL 177
            ++      +DL+ S++ M RAHEES  K  RV ++ +   +   A    G       P 
Sbjct: 125 NRERLKAQPMDLVYSLLVMIRAHEESDTKSKRVKASIKRLCDGWVAGHYRGLIRNGSDPR 184

Query: 178 WLDVTPDGYVLNPDKAAVVRRIFDLSTKGHGSRIIAATLNQEGIPAFSAGRKNFSGLWGF 237
           W+ +    + L P++  VVR   D   +GHG+    A + + G      G          
Sbjct: 185 WVRLVDGHWELIPERVEVVRFAIDKYREGHGADRAHAMMQERGFDTSYLGISP------- 237

Query: 238 STVRHILDSRTTLGEYQPHIFTDGKRTPDGDPIKDYFPSVVTEDEFYLAQAARTSRKTHS 297
             +  ++      G  Q  I  DG    +   +KDY+P ++T+ EF   Q  R  R    
Sbjct: 238 QQIYRLIKLVALKGAKQ--ISVDG----EDFLLKDYYPRLLTDVEFDELQLLRGQRSRRR 291

Query: 298 VTKATTNFNVLAGILNCYKCGSAMHLQG-----------QRGRKYYKC-SKTTRGLCDAG 345
              A        GI  C  CG+ M  Q              G +   C S   +G CD G
Sbjct: 292 GKGAIPGVVTGIGITYCGYCGTPMTAQNVMHKVRSDGTLMDGHRRIMCMSYMNKGGCDVG 351

Query: 346 --IISAPRTEQVFKEILTKVDSLSLVQ--DSSGSLQKSLQIVEGRIASLKAR 393
                AP    V      +++ L L Q    SG LQ+ + I    +  L+A+
Sbjct: 352 GSCSVAPVERAVMSFCSDQMNLLRLQQPVGPSGDLQQGVMISRKHVVDLEAQ 403