Pairwise Alignments

Query, 446 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

Subject, 468 a.a., Uncharacterized HTH-type transcriptional regulator YdcR from Escherichia coli ECRC62

 Score =  129 bits (323), Expect = 3e-34
 Identities = 108/436 (24%), Positives = 196/436 (44%), Gaps = 15/436 (3%)

Query: 10  LKQRLDAGEWLPGQRMPSIRKLTAAVDFSYHDVVSAYAQLVSEGVLTASPGRGYFVANRA 69
           L++++ +G W PG R+PS+R   A    S+  V  AY  L S+G + A P  GY+VA +A
Sbjct: 11  LREQIASGIWQPGDRLPSLRDQVALSGMSFMTVSHAYQLLESQGYIIARPQSGYYVAPQA 70

Query: 70  RQ------TSVIHEPECMAGDPLFRLLQGGQ--HFTKLGSGWLPPAWRDTELLAKAIRRT 121
            +        V  +        +F +LQ  +        S +  P     + L +++ + 
Sbjct: 71  IKMPKAPVIPVTRDEAVDINTYIFDMLQASRDPSVVPFASAFPDPRLFPLQQLNRSLAQV 130

Query: 122 ARLEQSSLAEYGDIQGYLPMRKQLCVHMKRLTRVEVRPNQLLTTLGATQGLDLVARLLIK 181
           ++   +         G   +R Q       L  + + P++++ T GA + L+L  + + +
Sbjct: 131 SKTATAMSVIENLPPGNAELR-QAIARRYALQGITISPDEIVITAGALEALNLSLQAVTE 189

Query: 182 PGDHVFVDEP-GNGNLIKLIQLAGGHVVGIRRTQDGPDVEEMRSHLARHKVKAFFCNSTF 240
           PGD V V+ P   G L  L +L    +      ++G D++ +   L  + VKA +  +  
Sbjct: 190 PGDWVIVENPCFYGALQALERLRLKALSVATDVKEGIDLQALELALQEYPVKACWLMTNS 249

Query: 241 HNPTGSNISPHNAFSVLRLAVEHEFFVVEDDVYGD--FSPAVRQTFAELDNLDRVIYIGS 298
            NP G  ++P     ++ L  ++   ++EDDVY +  F           D  D V++  S
Sbjct: 250 QNPLGFTLTPQKKAQLVALLNQYNVTLIEDDVYSELYFGREKPLPAKAWDRHDGVLHCSS 309

Query: 299 FSKCLSASLRVGFIACSQDLIEPLTRLKLLTCVAVPAFCERFVNTILSDGTYARHMKDVQ 358
           FSKCL    R+G++A  +     + RL+L++ ++  +  +  +   LS   Y  H++ ++
Sbjct: 310 FSKCLVPGFRIGWVAAGKH-ARKIQRLQLMSTLSTSSPMQLALVDYLSTRRYDAHLRRLR 368

Query: 359 QRLI-RQQVQTQRLLLERGWQFDI-APQGGMFLWVYHPDLPDLQPFVRKLEQHKILLMPG 416
           ++L  R+Q   Q LL     +  I     G FLW+  P+  D          H I + PG
Sbjct: 369 RQLAERKQRAWQALLRYLPAEVKIHHSDSGYFLWLELPEPLDAGELSLAALTHHISIAPG 428

Query: 417 SAFAVSRDYQRYTRIN 432
             F+   ++ R+ R N
Sbjct: 429 KMFSTGENWSRFFRFN 444