Pairwise Alignments

Query, 552 a.a., putative DNA ligase, ATP-dependent from Pseudomonas putida KT2440

Subject, 543 a.a., DNA ligase from Xanthobacter sp. DMC5

 Score =  314 bits (805), Expect = 5e-90
 Identities = 218/570 (38%), Positives = 295/570 (51%), Gaps = 47/570 (8%)

Query: 1   MKAFATLFLRLDATTSSNAKLEALRDYFDMAPAEDAAWAVYFLAGGRPRQLVPTRLLREL 60
           M  FA L  R+      NAK+  + DYF   P  +   A+  L G          L+R L
Sbjct: 1   MNRFAALLDRMSYEAGRNAKIRLMADYFRSTPDPERGLALAALTGALSFANAKPGLVRTL 60

Query: 61  ATTLAGLPDWLFEESYQAVGDLAETISLLLPLHADGNEEGLATWVEQHLLPLRGLTPEQV 120
               A     LFE SY  VGDL+ET++L+ P          A  + + +  L   +   +
Sbjct: 61  IAERAD--PVLFEMSYDYVGDLSETVALMWPRPEGAQPH--APLLSEIVHGLSTFSKVSL 116

Query: 121 RQRLPPLWARLDRASLMLCLKLITGSFRVGVSKLLVTRALAQLAGLDAKRVAQRLVGYTD 180
            + L      LD       LKLITGS RVG S  L   A+A L  +    V     G   
Sbjct: 117 PRHLADWLDGLDETGRWALLKLITGSMRVGASARLAKTAVASLGAVTPDEV-----GLVW 171

Query: 181 IGHRPTAASYQRLIAPESADEHNQRGGQPYPF---FLAHPLQVSSDQFDTLLGPPSDWQI 237
            G  P    Y+ L A             P PF    LAH ++ +   F TL   P+ +  
Sbjct: 172 PGLEPP---YEELFAWVEGRGPRPETSNPAPFRPVMLAHAIEEAD--FTTL--DPAAFSA 224

Query: 238 EWKWDGIRAQVVKRDGQ-----LWVWSRGEELVTERFPELHGLAQTLPDGVVLDGEILVW 292
           EWKWDGIR Q V   G      + ++SR  E +++ FP++   A+ +     +DGE+L+ 
Sbjct: 225 EWKWDGIRVQAVAGTGPDGVRVVRLYSRTGEDISDAFPDM---AEAITFDGAMDGELLIV 281

Query: 293 KPGETETELAVQPFALLQQRIGRKTLGKKLLNDAPVVLQAYDLLEWQGEDWRSRPQHERR 352
           + G       V+PF +LQQR+ RKT+  K+L + P  ++AYDLL    +D R +P   RR
Sbjct: 282 RDGR------VEPFNVLQQRLNRKTVTVKMLAEFPAHIRAYDLLVDGTDDLREQPFAARR 335

Query: 353 SQLEHLVDEHPLAPVLLSPLLQGPDWADLARQREQSRSLG-------VEGLMLKQREALY 405
           ++LE LV       + LSP++    W DL   R    S G       VEG+M+K+ ++ Y
Sbjct: 336 ARLEALVARLQTPRIDLSPMVPFSTWEDLTAARRDPASAGAGADAGAVEGVMIKRADSPY 395

Query: 406 GVGRTKDMGIWWKWKIDPFSVDAVLIYAQRGHGRRASLYSDYTFAVWDAPAGTPGRALVP 465
             GR K  G WWKWK DP +VDAVL+YAQRGHG+R+S YSDYTF VW   +      LVP
Sbjct: 396 LPGRPK--GPWWKWKRDPHTVDAVLMYAQRGHGKRSSFYSDYTFGVW-TQSEEGEDVLVP 452

Query: 466 FAKAYSGLSDEEMRKVDAIIRKTTVETFGPVRSVT----PTLVFELGFEGIALSRRHKSG 521
             KAY G +DEE++++DA +R+ T+  FGPVR V       LV E+ FEG+A S RH+SG
Sbjct: 453 VGKAYFGFTDEELKQIDAFVRRATINRFGPVREVVHEKDEGLVLEVAFEGLARSTRHRSG 512

Query: 522 IAVRFPRMLRWRLDKPVEEADDLATLQALL 551
           IA+RFPR+ R R DKP  EAD L TL+ALL
Sbjct: 513 IAMRFPRIARLRWDKPPGEADRLETLEALL 542