Pairwise Alignments

Query, 552 a.a., putative DNA ligase, ATP-dependent from Pseudomonas putida KT2440

Subject, 532 a.a., ATP-dependent DNA ligase (EC 6.5.1.1) LigC from Sphingobium sp. HT1-2

 Score =  320 bits (819), Expect = 1e-91
 Identities = 217/563 (38%), Positives = 292/563 (51%), Gaps = 42/563 (7%)

Query: 1   MKAFATLFLRLDATTSSNAKLEALRDYFDMAPAEDAAWAVYFLAGGRPRQLVPTRLLREL 60
           M+AF+ L   L  T S N KL  +  Y   AP  D  WA+  L G    + V    + E+
Sbjct: 1   MRAFSQLLDGLVYTRSRNGKLALIAAYMREAPDPDRGWALAALTGNLDLKAVKASAIGEM 60

Query: 61  ATTLAGLPDWLFEESYQAVGDLAETISLLLPLHADGNEE------GLATWVEQHLLPLRG 114
               A     LFE S   VGDLAET++LL P   D   E       L+  +++     R 
Sbjct: 61  IR--ARTDPVLFEMSRDYVGDLAETVALLWPRPHDEPAELDDGSLSLSAIIDRLHNVSRA 118

Query: 115 LTPEQVRQRLPPLWARLDRASLMLCLKLITGSFRVGVSKLLVTRALAQLAGLDAKRVAQR 174
             P+ + Q +      LD +     LKL TG  RVG+S  L     AQ  GLD   V Q 
Sbjct: 119 AAPDALAQMMD----HLDASGRFALLKLATGGLRVGISARLAKTGSAQAFGLDVDDVEQ- 173

Query: 175 LVGYTDIGHRPTAASYQRLIA-PESADEHNQRGGQPY--PFFLAHPLQVSSDQFDTLLGP 231
                 + H   A  Y  L    E         G PY  PF LAHPL+  S         
Sbjct: 174 ------VWHA-LAPPYAALFDWAEGRSGRPDPEGTPYFRPFMLAHPLEADSVDL------ 220

Query: 232 PSDWQIEWKWDGIRAQVVKRDGQLWVWSRGEELVTERFPELHGLAQTLPDGVVLDGEILV 291
            +D+  EWKWDGIR Q+V    +  ++SR  + +T  FPE+   AQ      VLDGE+LV
Sbjct: 221 -ADYAAEWKWDGIRIQIVGTGRETRLYSRAGDDITGSFPEI---AQAFTGHAVLDGELLV 276

Query: 292 WKP--GETETELAVQPFALLQQRIGRKTLGKKLLNDAPVVLQAYDLLEWQGEDWRSRPQH 349
                G  E   A   F  LQQR+GRK +  K++ D P  ++ YDLL    +D R+ P  
Sbjct: 277 KGEFQGAKEHGGAAASFNALQQRLGRKAVSAKMMADYPAFVRLYDLLIEGDDDLRALPWT 336

Query: 350 ERRSQLEHLVDEHPLAPVLLSPLLQGPDWADLARQREQSRSLGVEGLMLKQREALYGVGR 409
           +RR++LE  + +       LS ++  PD+A LA  R  +R   +EG+MLK+R++ Y  GR
Sbjct: 337 QRRARLEAYMAQLSPDRFDLSAVIDAPDFAALADIRAGARDAAIEGVMLKRRDSPYVAGR 396

Query: 410 TKDMGIWWKWKIDPFSVDAVLIYAQRGHGRRASLYSDYTFAVWDAPAGTPGRALVPFAKA 469
                +W+KWK DP + D V++YAQRGHG+R+S YSDYTF  W     T    L+P  KA
Sbjct: 397 KA--ALWYKWKRDPLTADCVMMYAQRGHGKRSSFYSDYTFGCW-----TEDGELLPVGKA 449

Query: 470 YSGLSDEEMRKVDAIIRKTTVETFGPVRSVTPTLVFELGFEGIALSRRHKSGIAVRFPRM 529
           YSG +DEE++ +D  +R  TV  FGPVR V  TLV E+ F+ I  S+RHKSG+A+RFPR+
Sbjct: 450 YSGFTDEELKWLDRFVRGNTVNRFGPVREVEKTLVLEVAFDSIHDSKRHKSGLAMRFPRI 509

Query: 530 LRWRLDKPVEEADDLATLQALLA 552
            R R DKP  EAD +  L+ L++
Sbjct: 510 ARIRRDKPAAEADTVEGLKRLVS 532