Pairwise Alignments

Query, 816 a.a., ATP-dependent helicase, DEAD box family from Pseudomonas putida KT2440

Subject, 826 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

 Score = 1139 bits (2947), Expect = 0.0
 Identities = 575/827 (69%), Positives = 676/827 (81%), Gaps = 14/827 (1%)

Query: 1   MPAATDLANAWFAKRGWKPFAFQRRVWAAVERGESGLLHASTGAGKTYAVWLAALRAF-- 58
           M  ATD A  WFA +GWKPFAFQ+ VWAAV+ G+SGLLHASTGAGKTYA+W AAL  F  
Sbjct: 1   MAKATDFAKRWFAAKGWKPFAFQKEVWAAVKSGQSGLLHASTGAGKTYALWFAALNRFAI 60

Query: 59  -------KPRPQGRHLAPIQVLWVTPMRALAADTARALQAPLDELQLPWSVGVRSGDTNS 111
                  K +P      P+ VLW+TPMRALAADTARAL+APL+ LQ+PWSVG+R+GDT+S
Sbjct: 61  ARPPVTAKRKPPAE---PLTVLWITPMRALAADTARALEAPLEALQIPWSVGLRTGDTSS 117

Query: 112 AERARQARRLPSVLITTPESLTLLLTRAKAREDFATLQLVVVDEWHELLGNKRGVQLQLA 171
           +ERARQ RR P+VL+TTPESLTL+L RA +    A L++VVVDEWHEL+GNKRGVQLQLA
Sbjct: 118 SERARQTRRQPTVLVTTPESLTLMLARADSEVSLAHLRMVVVDEWHELIGNKRGVQLQLA 177

Query: 172 LARLRHWHPGLPTWGLSATLGNLQHARDVLLPQG-GLLVQGRQDKALQVDTLLPKAIERF 230
           LARLR WHP L  WG+SATLGN  HA +VL+PQG G+ VQG+  K L +DTLLP   ERF
Sbjct: 178 LARLRRWHPDLMVWGISATLGNQAHALEVLVPQGDGINVQGQTAKQLIIDTLLPPVTERF 237

Query: 231 PWAGHMGLKMLDQVCHEIDASASSLVFTNTRAQAEIWYQALLEARPDWAGLIALHHASLA 290
           PWAGH+GLKML QV  E+DAS+S LVFTNTRAQ+EIW+QALL+ARPDWAG+IALHH SL+
Sbjct: 238 PWAGHIGLKMLPQVVAEVDASSSCLVFTNTRAQSEIWFQALLDARPDWAGVIALHHGSLS 297

Query: 291 RDTRDWVERSLKQGSLKAVICTSSLDLGVDFLPVERVLQIGSAKGIARLMQRAGRSGHAP 350
           R+TRDWVER+LK G LKAV+CTSSLDLGVDFLPVERVLQIGSAKG+ARLMQRAGRSGHAP
Sbjct: 298 RETRDWVERALKDGQLKAVVCTSSLDLGVDFLPVERVLQIGSAKGVARLMQRAGRSGHAP 357

Query: 351 GRRSRVTLVPTHSLELVEAAAARQALLAGHIEARFSPRLCMDVLVQHLVSMALGSGFRPE 410
           GR SRVTLVPTHSLELVEAAAA+ A+    IEAR SP   +DVLVQHLVSMALG G++P+
Sbjct: 358 GRPSRVTLVPTHSLELVEAAAAQDAIAQRRIEARESPYKPLDVLVQHLVSMALGGGYKPD 417

Query: 411 QLLAEVRSTWAFRQLRDSQWQWALDFVCHGGSSLTAYPDYQRVERQADGVYRVTSERLAR 470
            LL EVR  WA+  L D  W WAL FV HGG SLTAYPDY+RVE    G++RV   RLAR
Sbjct: 418 DLLVEVRGAWAYHDLTDEDWAWALGFVRHGGLSLTAYPDYRRVEPDEHGIWRVPDARLAR 477

Query: 471 RHRMGIGTIVSDANLQLKYWSKGGGGKTLGSVEEAFIARLRPGDTLVFAGRVLELVRVEN 530
           RHRM +GTIVSDA++ LK+WSKGGGGK LGSVEE FIARL+PGD  +FAGR+LELVRVEN
Sbjct: 478 RHRMSVGTIVSDASIHLKFWSKGGGGKNLGSVEEGFIARLKPGDGFLFAGRLLELVRVEN 537

Query: 531 MTAYVRRSTARKAAVARWNGGRMPLSSELADALVEQLDAAAHERFEGPEMRAVRPLLALQ 590
           MTAYVRRS A+KAAV RWNGGRMPLS+ELA A+VE+ DAAA   FEGPEM+AVRPLL  Q
Sbjct: 538 MTAYVRRSNAKKAAVPRWNGGRMPLSNELAQAVVERFDAAAQGHFEGPEMQAVRPLLQTQ 597

Query: 591 AQWSALPTTSTLLAETFKSRQGWHLFLYPFAGRMANLGLANLIAWRVSRAQPLSVSIAVN 650
            +WS LPT   LLAE  KSR+GWHLFLYPFAGR  +LGLA+L+AWRVS+ Q ++ SIAVN
Sbjct: 598 VRWSGLPTREHLLAEALKSREGWHLFLYPFAGRQVHLGLASLLAWRVSQGQAVTFSIAVN 657

Query: 651 DYGFELLSPAQVDWASHLPQALGTAD-LLEDVLASLNAGEMALRRFREIAQIAGLVFGGY 709
           DYG ELLS  +V+W + L +AL + + LLEDV+ASLNAGE+ALRRFREIA+IAGLVF GY
Sbjct: 658 DYGLELLSATEVNWPALLNEALLSPEHLLEDVVASLNAGELALRRFREIARIAGLVFAGY 717

Query: 710 PAAQKSTRQIQASSGLFYEVFRKHDAGNLLLGQARDEVLSEELEIERLHRQLLKMSELQL 769
           P A KSTRQ+QASSGLF+EVF+++D  NLLL QA +EVL +EL+I RL + L  +  L+L
Sbjct: 718 PGAPKSTRQVQASSGLFFEVFKQYDPQNLLLTQAGEEVLRDELDIRRLEQTLRHLCALKL 777

Query: 770 DLQALRRPGPLAFALLVEGMRETLSTEKLADRIARMVAELEQAANAG 816
           +L  ++RP PLAF LLVE MRE++S+EKL++RIARMV +LE+ A+ G
Sbjct: 778 ELHRIQRPTPLAFPLLVERMRESMSSEKLSERIARMVKDLEKVADNG 824