Pairwise Alignments

Query, 816 a.a., ATP-dependent helicase, DEAD box family from Pseudomonas putida KT2440

Subject, 868 a.a., ligase-associated DNA damage response DEXH box helicase from Variovorax sp. OAS795

 Score = 1002 bits (2591), Expect = 0.0
 Identities = 516/819 (63%), Positives = 625/819 (76%), Gaps = 18/819 (2%)

Query: 9   NAWFAKRGWKPFAFQRRVWAAVERGESGLLHASTGAGKTYAVWLAALRAFKP--RPQGRH 66
           + WFA RGWKPF FQR VW A+  G SG+LHA+TGAGKTYAVWL AL+ F    +  GR 
Sbjct: 7   DTWFAARGWKPFKFQREVWKAIAEGRSGMLHATTGAGKTYAVWLGALQVFSKARKETGRP 66

Query: 67  LAP-IQVLWVTPMRALAADTARALQAPLDELQ---LPWSVGVRSGDTNSAERARQARRLP 122
            AP + VLW+TPMRALAADT RA++ PL+ L     PWS G RSGDT+SAERA Q  RLP
Sbjct: 67  AAPPLTVLWLTPMRALAADTLRAIRQPLEALGGEVHPWSAGARSGDTSSAERAAQNERLP 126

Query: 123 SVLITTPESLTLLLTRAKAREDFATLQLVVVDEWHELLGNKRGVQLQLALARLRHWHPGL 182
           + L+TTPESL+LLL RA A +    +++VVVDEWHELLGNKRGVQ+QLALARLR W+PGL
Sbjct: 127 TALVTTPESLSLLLARADASQVLGRVRMVVVDEWHELLGNKRGVQVQLALARLRRWNPGL 186

Query: 183 PTWGLSATLGNLQHARDVLL-PQGGLLVQGRQDKALQVDTLLPKAIERFPWAGHMGLKML 241
             WG+SATLGNL  A   LL  + G+LVQG+  K L VD+LLP   ERFPW GH+GL ML
Sbjct: 187 MVWGMSATLGNLHEAMHALLGDEEGVLVQGQVPKKLVVDSLLPGRAERFPWGGHLGLTML 246

Query: 242 DQVCHEIDASASSLVFTNTRAQAEIWYQALLEARPDWAGLIALHHASLARDTRDWVERSL 301
            QV  EI +S+++LVFTNTR+Q+EIWYQA+LEARP+WAGLIALHH SL R  R+WVE  L
Sbjct: 247 PQVLDEIASSSTTLVFTNTRSQSEIWYQAMLEARPEWAGLIALHHGSLDRAVREWVELGL 306

Query: 302 KQGSLKAVICTSSLDLGVDFLPVERVLQIGSAKGIARLMQRAGRSGHAPGRRSRVTLVPT 361
           K G LKAV+CTSSLDLGVDFLPVERVLQIGS KG+ARL+QRAGRSGHAPGR SRVTLVPT
Sbjct: 307 KSGELKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLLQRAGRSGHAPGRPSRVTLVPT 366

Query: 362 HSLELVEAAAARQALLAGHIEARFSPRLCMDVLVQHLVSMALGSGFRPEQLLAEVRSTWA 421
           HS+E+VE AAAR A+ AGHIEAR +P   +DVLVQHLV++ALG GF P  L AEVR T A
Sbjct: 367 HSIEMVEGAAARAAIAAGHIEARHTPAQPLDVLVQHLVTVALGGGFVPNDLYAEVRGTAA 426

Query: 422 FRQLRDSQWQWALDFVCHGGSSLTAYPDYQRVERQADGVYRVTSERLARRHRMGIGTIVS 481
           +  L    W+W L FV  GG SL AYPDY+R    A+GV+RV   RLARRHRM IGTIVS
Sbjct: 427 YASLSRESWEWCLSFVSQGGPSLAAYPDYRRAVPDAEGVWRVPDARLARRHRMNIGTIVS 486

Query: 482 DANLQLKYWSKGGGGKTLGSVEEAFIARLRPGDTLVFAGRVLELVRVENMTAYVRRSTAR 541
           DA++ ++Y     GG  +GSVEE F+AR++PGD  +F GR+LELVR+ +MTA+VRR+  +
Sbjct: 487 DASMAVQYM----GGAKIGSVEEGFVARMKPGDCFLFGGRLLELVRIHDMTAWVRRAAGK 542

Query: 542 KAAVARWNGGRMPLSSELADALVEQLDAAAHERFEGPEMRAVRPLLALQAQWSALPTTST 601
           +AAV RWNGGRMPLS+ LADA+V+QL  A   R++ PE++ VR LL +Q QWSALPT  T
Sbjct: 543 RAAVPRWNGGRMPLSTTLADAVVQQLALAGEGRYDSPELQCVRHLLEIQQQWSALPTPQT 602

Query: 602 LLAETFKSRQGWHLFLYPFAGRMANLGLANLIAWRVSRAQPLSVSIAVNDYGFELLSPAQ 661
           LLAET  +R+G HLFLYPFAGR  ++GLA+L+AWRV++ +  + SIAVNDYGFELLS   
Sbjct: 603 LLAETLTTREGSHLFLYPFAGRHVHMGLASLLAWRVAQHEARTFSIAVNDYGFELLSAVP 662

Query: 662 VDWASHLPQAL-------GTADLLEDVLASLNAGEMALRRFREIAQIAGLVFGGYPAAQK 714
           VDW + LPQ L         A LL +VLASLNAGE+A RRFREIA+++GL+F GYP  ++
Sbjct: 663 VDWPALLPQVLRLPEGEDAHARLLHEVLASLNAGELAQRRFREIARVSGLIFQGYPGEKR 722

Query: 715 STRQIQASSGLFYEVFRKHDAGNLLLGQARDEVLSEELEIERLHRQLLKMSELQLDLQAL 774
           S+RQ+QASS LF+EVFRK+D  N LL QA  E+L++ELEI RL   L +M+  QL L+ L
Sbjct: 723 SSRQLQASSSLFWEVFRKYDPSNKLLLQAEQELLAQELEIGRLRASLARMATQQLVLKPL 782

Query: 775 RRPGPLAFALLVEGMRETLSTEKLADRIARMVAELEQAA 813
            RP P +F L+VE  RE LS E +ADRIARMV +LE+AA
Sbjct: 783 ERPTPFSFPLMVELFREKLSNENVADRIARMVEQLEKAA 821