Pairwise Alignments

Query, 816 a.a., ATP-dependent helicase, DEAD box family from Pseudomonas putida KT2440

Subject, 860 a.a., DEXH box helicase, DNA ligase-associated from Pseudomonas sp. S08-1

 Score = 1135 bits (2937), Expect = 0.0
 Identities = 567/823 (68%), Positives = 679/823 (82%), Gaps = 13/823 (1%)

Query: 7   LANAWFAKRGWKPFAFQRRVWAAVERGESGLLHASTGAGKTYAVWLAALRAF-------- 58
           LA AWF +RGWK F FQR VW AV +GESG+L+A+TG+GKTYAVWLAAL  F        
Sbjct: 3   LAGAWFVQRGWKAFPFQREVWQAVAKGESGMLYATTGSGKTYAVWLAALNRFAKAIPATT 62

Query: 59  ---KPRPQGRHLAPIQVLWVTPMRALAADTARALQAPLDELQLPWSVGVRSGDTNSAERA 115
              +PR +    AP+ VLW+TPMRALAADT RALQAPLD+L + WSVG+R+GDT S+ERA
Sbjct: 63  ASGQPRKRQPAAAPLSVLWITPMRALAADTQRALQAPLDDLNIAWSVGLRTGDTGSSERA 122

Query: 116 RQARRLPSVLITTPESLTLLLTRAKAREDFATLQLVVVDEWHELLGNKRGVQLQLALARL 175
           RQ R+LPS LITTPESLTLLLTR+ A   FA L+++VVDEWHELLGNKRGVQLQLALARL
Sbjct: 123 RQGRKLPSALITTPESLTLLLTRSDAEAQFAGLRMLVVDEWHELLGNKRGVQLQLALARL 182

Query: 176 RHWHPGLPTWGLSATLGNLQHARDVLLPQG-GLLVQGRQDKALQVDTLLPKAIERFPWAG 234
           R W+PGL  WGLSATLGN +HA  VLL    G LVQG+QDK+L++DTLLP  IERFPWAG
Sbjct: 183 RRWNPGLIVWGLSATLGNQKHALQVLLGDTPGRLVQGKQDKSLRIDTLLPPGIERFPWAG 242

Query: 235 HMGLKMLDQVCHEIDASASSLVFTNTRAQAEIWYQALLEARPDWAGLIALHHASLARDTR 294
           H+GL+ML QV  E++AS +SL+FTNTR+QAEIWYQALL+ARPDWAGLIALHH SL+R+ R
Sbjct: 243 HLGLRMLPQVVEEVEASGTSLLFTNTRSQAEIWYQALLDARPDWAGLIALHHGSLSREVR 302

Query: 295 DWVERSLKQGSLKAVICTSSLDLGVDFLPVERVLQIGSAKGIARLMQRAGRSGHAPGRRS 354
           DWVE  LK+G LKAV+CTSSLDLGVDFLPVERVLQIGSAKG+ARL+QRAGRSGHAPGR S
Sbjct: 303 DWVELGLKEGRLKAVVCTSSLDLGVDFLPVERVLQIGSAKGVARLLQRAGRSGHAPGRAS 362

Query: 355 RVTLVPTHSLELVEAAAARQALLAGHIEARFSPRLCMDVLVQHLVSMALGSGFRPEQLLA 414
           R++LVPTH+LEL+EAAA + A+ AG IEAR SP+  +DVLVQHLVSMALG GFRP++L  
Sbjct: 363 RISLVPTHALELIEAAAVQDAVAAGRIEARQSPQKPLDVLVQHLVSMALGGGFRPDELRE 422

Query: 415 EVRSTWAFRQLRDSQWQWALDFVCHGGSSLTAYPDYQRVERQADGVYRVTSERLARRHRM 474
           EVRS WA+R+L D +WQWAL FV HGG+SLTAYPDYQRVE    G++RV +  LARRHRM
Sbjct: 423 EVRSAWAYRKLSDEEWQWALAFVRHGGNSLTAYPDYQRVEPDEQGIWRVPNAALARRHRM 482

Query: 475 GIGTIVSDANLQLKYWSKGGGGKTLGSVEEAFIARLRPGDTLVFAGRVLELVRVENMTAY 534
            +GTIVSDA++ +K+W+KGG G++LGSVEE FIARLRPGD  +FAGR+LELVRVENMTAY
Sbjct: 483 SVGTIVSDASIAVKFWAKGGSGRSLGSVEEGFIARLRPGDCFLFAGRLLELVRVENMTAY 542

Query: 535 VRRSTARKAAVARWNGGRMPLSSELADALVEQLDAAAHERFEGPEMRAVRPLLALQAQWS 594
           V R+T+RKAAV RWNGGRMPLSSELADA+V +   AA  +F GPEM+ +RPLL +Q  WS
Sbjct: 543 VNRATSRKAAVPRWNGGRMPLSSELADAVVARFGEAAQGQFRGPEMQLLRPLLEVQQAWS 602

Query: 595 ALPTTSTLLAETFKSRQGWHLFLYPFAGRMANLGLANLIAWRVSRAQPLSVSIAVNDYGF 654
           ALPT+ +LLAET  SR+GWHLFLYPFAGR  +LGLA+L+AWR+ + QP + SIAVNDYG 
Sbjct: 603 ALPTSQSLLAETLHSREGWHLFLYPFAGRSVHLGLASLLAWRLGQLQPATFSIAVNDYGL 662

Query: 655 ELLSPAQVDWASHLPQA-LGTADLLEDVLASLNAGEMALRRFREIAQIAGLVFGGYPAAQ 713
           ELL  + VDW   L  A L + DLL DVLASLNAGE+A RRFREIA+IAGLVFGGYP A 
Sbjct: 663 ELLCASPVDWPRWLNNALLRSDDLLHDVLASLNAGELARRRFREIARIAGLVFGGYPGAA 722

Query: 714 KSTRQIQASSGLFYEVFRKHDAGNLLLGQARDEVLSEELEIERLHRQLLKMSELQLDLQA 773
           KS RQ+QASSGLF++VF+++D GNLLL QA++EVL +EL+++ L   L ++  L+LDL+ 
Sbjct: 723 KSARQLQASSGLFFDVFQQYDPGNLLLTQAQEEVLRQELDVQHLQHTLQRLRGLRLDLRE 782

Query: 774 LRRPGPLAFALLVEGMRETLSTEKLADRIARMVAELEQAANAG 816
           ++RP PLAF LLVE  RE+LS+EKLADRIAR++A+LE+AA  G
Sbjct: 783 VQRPPPLAFPLLVERFRESLSSEKLADRIARLLADLEKAAGPG 825