Pairwise Alignments

Query, 816 a.a., ATP-dependent helicase, DEAD box family from Pseudomonas putida KT2440

Subject, 859 a.a., ATP-dependent helicase from Caulobacter crescentus NA1000 Δfur

 Score =  419 bits (1077), Expect = e-121
 Identities = 290/852 (34%), Positives = 435/852 (51%), Gaps = 61/852 (7%)

Query: 10  AWFAKRGWKPFAFQRRVWAAVERGESGLLHASTGAGKTYAVWLAALRAFKPRPQGRHLAP 69
           AWFAKRGW P   Q  +      G   LL A TG GKT A +L +L     RP     A 
Sbjct: 13  AWFAKRGWTPRDHQLAMLDKARAGRGALLIAPTGGGKTLAGFLPSLIELAERPPRNTPAG 72

Query: 70  IQVLWVTPMRALAADTARALQAPLDELQLPWSVGVRSGDTNSAERARQARRLPSVLITTP 129
           +  L+++P++ALA D  R L  P+ E+ LP     R+GDT  + +ARQ  R P +L+TTP
Sbjct: 73  VHTLYISPLKALAVDVERNLLTPIREMGLPIVAESRTGDTGESRKARQKVRPPDILLTTP 132

Query: 130 ESLTLLLTRAKAREDFATLQLVVVDEWHELLGNKRGVQLQLALARLRHWHPGLPTWGLSA 189
           E L L      ARE F+ L+ V++DE H +  +KRG  L L L+RL+ + P +   GLSA
Sbjct: 133 EQLALFCAWEGAREYFSDLRCVIIDEAHAIWPSKRGDLLALGLSRLQQFAPNMRRVGLSA 192

Query: 190 TLGNLQHARDVL--------LPQGGLL----VQGRQDKALQVDTL-----LPKA------ 226
           T+ +    R  L         P+ G +     +G     LQ+        LP+A      
Sbjct: 193 TVDDPDLVRKWLGVNRVENPPPRAGEVSAEPTEGASTADLQLALSGPPGHLPRAQGRICE 252

Query: 227 ---------------IE------RFPWAGHMGLKMLDQVCHEIDASASSLVFTNTRAQAE 265
                          +E      R PWAGH     + +V   I A+ ++LVF NTR QAE
Sbjct: 253 PDIDLVLGAGGAQPVVEVLVSGGRVPWAGHTAEHAMAEVYDIIKAAKTALVFVNTRFQAE 312

Query: 266 IWYQALLEARPDWAGL-IALHHASLARDTRDWVERSLKQGSLKAVICTSSLDLGVDFLPV 324
             +Q L E   +  GL IALHH SL+ + R  VE ++ +G L+AV+CTS+LD+G+D+  V
Sbjct: 313 FAFQRLWELNDE--GLPIALHHGSLSAEQRRKVEAAMARGELRAVVCTSTLDMGIDWGDV 370

Query: 325 ERVLQIGSAKGIARLMQRAGRSGHAPGRRSRVTLVPTHSLELVEAAAARQALLAGHIEAR 384
           + V+Q+ + KG +R++QR GR+ H     SR   VP    E++E  AA  A+L  H++  
Sbjct: 371 DLVIQLAAPKGASRMVQRIGRANHRLDEPSRAIFVPASRFEMLECRAAADAILENHLDGE 430

Query: 385 FSPRLCMDVLVQHLVSMALGSGFRPEQLLAEVRSTWAFRQLRDSQWQWALDFVCHGGSSL 444
                 +DVL QH++  A    F+P  L  EVRS   + +L    ++  +DFV  GG +L
Sbjct: 431 PPRTGALDVLAQHIMGCACSEPFKPTDLYDEVRSAGPYAELTWEDFEAVVDFVSTGGYAL 490

Query: 445 TAYPDYQRVERQADGVYRVTSERLARRHRMGIGTIVSDA--NLQLKYWSKGGGGKTLGSV 502
             Y  ++R+ + ADG+    + +  ++HRM +G I+S A  N+++    K  GG+ +G  
Sbjct: 491 RTYDKFRRIVQIADGLRTARNAQARQQHRMNVGAIISPAMINIRIGGGRKPVGGRKIGEA 550

Query: 503 EEAFIARLRPGDTLVFAGRVLELVRVENMTAYVRRSTARKAAVARWNGGRMPLSSELADA 562
           EE +  +L PGDT VFAG+V     +    AYV  +      +  W G + PLS+ LA+ 
Sbjct: 551 EEGYFEQLTPGDTFVFAGQVWRYNSLVGADAYVSPAPNDDPKMPSWGGSKFPLSTYLAER 610

Query: 563 LVEQLDAAAHERFEGPEMRA-VRPLLALQAQWSALPTTSTLLAETFKSRQGWHLFLYPFA 621
           + + +    H+  E   +   V+  L+ Q   SA+P    +L ETF   + +H+  YPF 
Sbjct: 611 VRQMM----HDEREWSALPGDVQEWLSWQKIRSAIPAEGEMLLETFPRGKRFHMVCYPFD 666

Query: 622 GRMANLGLANLIAWRVSRAQPLSVSIAVNDYGFELLSPAQVDWASHLPQALGTADLLEDV 681
           GR+A+  LA L+  R+ R     +    NDY   L S   +D    L +      L +D+
Sbjct: 667 GRLAHTTLAMLLTRRLDRLGVGPLGFVCNDYALNLWSLRPMD-DLDLDELFAQDMLGDDL 725

Query: 682 LASLNAGEMALRRFREIAQIAGLVFGGYPAAQKSTRQIQASSGLFYEVFRKHDAGNLLLG 741
            A L+   M  R F+  A IAGL+   +P A+KS RQ+  S+ L Y+V RKH   +L+L 
Sbjct: 726 EAWLDESFMMKRSFKHCALIAGLIERRHPGAEKSGRQVTFSTDLIYDVLRKHQPDHLMLR 785

Query: 742 QARDEVLSEELEIERLHRQLLKMSELQLDLQALRRPGPLAFALLVEGMRETLSTEK---- 797
            AR +  +  L+I RL   L ++   ++   AL R  P A  +++E  RE    +     
Sbjct: 786 CARLDAATGLLDIARLGDMLTRVRG-RIRHVALDRVSPFAVPMMLEIGRERAPGDAAGEM 844

Query: 798 -LADRIARMVAE 808
            LA+  A ++AE
Sbjct: 845 ILAEAEADLIAE 856