Pairwise Alignments

Query, 212 a.a., DNA glycosylase/apyrimidinic (AP) lyase specific for damaged pyrimidinic sites from Pseudomonas putida KT2440

Subject, 315 a.a., Endonuclease III from Xanthobacter sp. DMC5

 Score =  244 bits (623), Expect = 1e-69
 Identities = 123/205 (60%), Positives = 148/205 (72%)

Query: 4   AKRLEIFRRLHEDNPDPKTELAYTTPFELLVAVTLSAQSTDVGVNKATARLFPVANTPEA 63
           A+  E F R    +P+PK EL +T  F LLVAV LSAQ+TD GVNKAT  LF  A+TP A
Sbjct: 109 AEITEAFTRFEAQDPEPKGELDHTDAFTLLVAVVLSAQATDTGVNKATKGLFAAASTPAA 168

Query: 64  IYALGVEGLSEYIKTIGLYNSKAKNVIEACRLLIERHDSQVPQTREALEALPGVGRKTAN 123
           + ALG + ++ +I+T+GL+  KAKNV+E  RLL+ERH   VPQ REALEALPGVGRKTAN
Sbjct: 169 MAALGEDQVAHHIRTLGLFRGKAKNVVELSRLLLERHAGVVPQDREALEALPGVGRKTAN 228

Query: 124 VVLNTAFRQPAMAVDTHIFRVSNRTGIAPGKTVLEVEKKLLKFVPKDYLLDAHHWLILHG 183
           VVLN AF  P +AVDTH+FRV+NRTG+APG T L VE  L   +P  + L AHHWLILHG
Sbjct: 229 VVLNIAFGVPTIAVDTHLFRVANRTGLAPGATPLAVELGLEARIPDRFKLHAHHWLILHG 288

Query: 184 RYVCQARKPRCGSCRIEDLCEYKHK 208
           RY+C+A KP C  C I DLC +  K
Sbjct: 289 RYICKATKPACSRCLITDLCRWPDK 313