Pairwise Alignments

Query, 212 a.a., DNA glycosylase/apyrimidinic (AP) lyase specific for damaged pyrimidinic sites from Pseudomonas putida KT2440

Subject, 215 a.a., Endonuclease III (EC 4.2.99.18) from Variovorax sp. SCN45

 Score =  295 bits (754), Expect = 6e-85
 Identities = 143/200 (71%), Positives = 162/200 (81%)

Query: 10  FRRLHEDNPDPKTELAYTTPFELLVAVTLSAQSTDVGVNKATARLFPVANTPEAIYALGV 69
           F  L   NP+P+TEL YTTPFELL AV LSAQ+TDVGVNKAT +LFPVANTP+AIY LGV
Sbjct: 10  FATLQAANPEPQTELEYTTPFELLAAVLLSAQATDVGVNKATRKLFPVANTPQAIYDLGV 69

Query: 70  EGLSEYIKTIGLYNSKAKNVIEACRLLIERHDSQVPQTREALEALPGVGRKTANVVLNTA 129
           EGL EYIKTIGLY SKAK++IE CR+L+E+H  +VP+TR  LEALPGVGRKTANVVLN A
Sbjct: 70  EGLEEYIKTIGLYRSKAKHLIETCRMLVEQHGGEVPRTRAELEALPGVGRKTANVVLNVA 129

Query: 130 FRQPAMAVDTHIFRVSNRTGIAPGKTVLEVEKKLLKFVPKDYLLDAHHWLILHGRYVCQA 189
           F +  +AVDTHIFR+ NRTG+APGKT LEVE KL K VP  Y L AHHWLILHGRY+C A
Sbjct: 130 FGEATIAVDTHIFRMGNRTGLAPGKTPLEVELKLEKRVPLQYRLHAHHWLILHGRYICVA 189

Query: 190 RKPRCGSCRIEDLCEYKHKT 209
           RKPRC  C +   C+YK KT
Sbjct: 190 RKPRCWECAVATFCDYKPKT 209