Pairwise Alignments

Query, 212 a.a., DNA glycosylase/apyrimidinic (AP) lyase specific for damaged pyrimidinic sites from Pseudomonas putida KT2440

Subject, 225 a.a., endonuclease III from Bacteroides ovatus ATCC 8483

 Score =  189 bits (480), Expect = 3e-53
 Identities = 99/208 (47%), Positives = 137/208 (65%), Gaps = 3/208 (1%)

Query: 1   MNAAKRLEIFRRLHEDN-PDPKTELAYTTPFELLVAVTLSAQSTDVGVNKATARLFPVAN 59
           M   +R E      +DN P  +TEL Y  P+ELL+AV LSAQ TD  VN  T  L+    
Sbjct: 1   MRKKERYEKVIAWFQDNIPVAETELHYNNPYELLIAVILSAQCTDKRVNIITPPLYKDFP 60

Query: 60  TPEAIYALGVEGLSEYIKTIGLYNSKAKNVIEACRLLIERHDSQVPQTREALEALPGVGR 119
           TPEA+ A   E + EYI+++   N+KAK+++   ++L+   +S+VP   E L  LPGVGR
Sbjct: 61  TPEALAATTPEVIFEYIRSVSYPNNKAKHLVGMAKMLVNDFNSEVPDNLEDLIKLPGVGR 120

Query: 120 KTANVVLNTAFRQPAMAVDTHIFRVSNRTGIAPGK--TVLEVEKKLLKFVPKDYLLDAHH 177
           KTANV+ +  F++ AMAVDTH+FRVS+R G+ P    T   VEK+L+K +P+  +  AHH
Sbjct: 121 KTANVIQSVVFKKAAMAVDTHVFRVSHRIGLVPDSCTTPFSVEKELVKNIPEKLIPIAHH 180

Query: 178 WLILHGRYVCQARKPRCGSCRIEDLCEY 205
           WLILHGRYVCQAR P+C +C ++ +C+Y
Sbjct: 181 WLILHGRYVCQARTPKCDTCGLQMMCKY 208