Pairwise Alignments

Query, 212 a.a., DNA glycosylase/apyrimidinic (AP) lyase specific for damaged pyrimidinic sites from Pseudomonas putida KT2440

Subject, 211 a.a., DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) from Escherichia coli BL21

 Score =  309 bits (792), Expect = 2e-89
 Identities = 149/208 (71%), Positives = 174/208 (83%)

Query: 1   MNAAKRLEIFRRLHEDNPDPKTELAYTTPFELLVAVTLSAQSTDVGVNKATARLFPVANT 60
           MN AKRLEI  RL E+NP P TEL +++PFELL+AV LSAQ+TDV VNKATA+L+PVANT
Sbjct: 1   MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT 60

Query: 61  PEAIYALGVEGLSEYIKTIGLYNSKAKNVIEACRLLIERHDSQVPQTREALEALPGVGRK 120
           P A+  LGVEG+  YIKTIGLYNSKA+N+I+ CR+L+E+H+ +VP+ R ALEALPGVGRK
Sbjct: 61  PAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRK 120

Query: 121 TANVVLNTAFRQPAMAVDTHIFRVSNRTGIAPGKTVLEVEKKLLKFVPKDYLLDAHHWLI 180
           TANVVLNTAF  P +AVDTHIFRV NRT  APGK V +VE+KLLK VP ++ +D HHWLI
Sbjct: 121 TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI 180

Query: 181 LHGRYVCQARKPRCGSCRIEDLCEYKHK 208
           LHGRY C ARKPRCGSC IEDLCEYK K
Sbjct: 181 LHGRYTCIARKPRCGSCIIEDLCEYKEK 208