Pairwise Alignments

Query, 212 a.a., DNA glycosylase/apyrimidinic (AP) lyase specific for damaged pyrimidinic sites from Pseudomonas putida KT2440

Subject, 260 a.a., endonuclease III from Agrobacterium fabrum C58

 Score =  250 bits (638), Expect = 2e-71
 Identities = 123/204 (60%), Positives = 151/204 (74%)

Query: 8   EIFRRLHEDNPDPKTELAYTTPFELLVAVTLSAQSTDVGVNKATARLFPVANTPEAIYAL 67
           EIFRR     P+PK EL +T PF LLVAV LSAQ+TDVGVN+AT  LF VA+TPE + AL
Sbjct: 38  EIFRRFSIQRPEPKGELEHTNPFTLLVAVALSAQATDVGVNRATRALFKVADTPEKMLAL 97

Query: 68  GVEGLSEYIKTIGLYNSKAKNVIEACRLLIERHDSQVPQTREALEALPGVGRKTANVVLN 127
           G E L  +IKTIGLY +KAKNVI   ++LI+    +VP+TRE L  LPGVGRKTANVV++
Sbjct: 98  GEEQLIGHIKTIGLYRNKAKNVIALSQMLIDNFGGEVPKTREELVTLPGVGRKTANVVMS 157

Query: 128 TAFRQPAMAVDTHIFRVSNRTGIAPGKTVLEVEKKLLKFVPKDYLLDAHHWLILHGRYVC 187
            AF  P +AVDTH+FR++NR  +APGKT  EVE +L++ +P+ YL  AHHWLILHGRY C
Sbjct: 158 MAFGVPTLAVDTHVFRIANRLCLAPGKTTDEVEDRLVRIIPEQYLFHAHHWLILHGRYCC 217

Query: 188 QARKPRCGSCRIEDLCEYKHKTSD 211
           +ARKP C  C I D+C+   KT D
Sbjct: 218 KARKPECERCVIADICKSPEKTFD 241