Pairwise Alignments

Query, 369 a.a., putative ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 358 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

 Score =  213 bits (542), Expect = 7e-60
 Identities = 141/366 (38%), Positives = 194/366 (53%), Gaps = 31/366 (8%)

Query: 7   LNLRNLACGYGDQRIVQNLNLHLNAGDIGCLLGSSGCGKTTTLRAIAGFEPVHEGEIHLA 66
           L L NL C Y     V+NLNL +  G++  LLG SGCGK+TTLR +AGF     G I   
Sbjct: 4   LRLDNLQCTYDRTVAVRNLNLDVAQGELLALLGPSGCGKSTTLRMVAGFVQPSAGRIFFG 63

Query: 67  GEVISRAGFTLAPEKRRIGMVFQDYALFPHLTVAQNIAFGIA--KHPR--QAAVIEEMLE 122
              ++ A     P  R  GMVFQ YALF H++VA+N+AFG+   K PR  QAA ++E L 
Sbjct: 64  EREVTHA----PPHARDTGMVFQGYALFMHMSVAENVAFGLQMRKVPRAEQAARVKEALR 119

Query: 123 LVKLGGLGGRYPHELSGGQQQRVALARALAPEPQLLLLDEPFSNLDVELRRRLSHEVRDI 182
           LV+L  L  R P  LSGGQQQRVALARAL  +P + LLDEP SNLD  LR  +  E+R +
Sbjct: 120 LVRLDHLADRRPAALSGGQQQRVALARALVVQPAVFLLDEPMSNLDARLRTEVRLEIRAL 179

Query: 183 LKSRGTSAILVTHDQEEAFAVSDQVGVFKEGRLEQWDTPYNLYHEPQTPFVASFIGQGYF 242
            +  G + +LVTHDQEEA   +D++ V   GR+ Q  TP  +Y +P   FVA+FIG+   
Sbjct: 180 QQRLGLTTLLVTHDQEEALTTADRLAVMDHGRVRQVGTPRQVYEQPVDQFVANFIGRCNL 239

Query: 243 IRGQMSSHEAVNTEVGELRGNRAYIMAP-------GSSVDVLLRPD--DIVHAPGSALMA 293
           + G++ +            G  A   AP        + + +++RPD   I +A    L A
Sbjct: 240 VPGRLDAPGVFRA------GAHALPCAPFEGLQSTKNDLALMVRPDRIRIANAGEQGLPA 293

Query: 294 NIVGKSFLGASTLYRLQLPTGSQLEAIFPSHNDHEI-------GENVEIAVKADHLVLFP 346
            +   ++LG +T +  +   G  +    PS   H         GE V +    +H +  P
Sbjct: 294 RVRLSTYLGGTTEWNFETDVG-PIAVAQPSTLAHGTGARGPAEGERVSLQWSPEHALALP 352

Query: 347 VPGSVA 352
              + A
Sbjct: 353 ADATSA 358