Pairwise Alignments

Query, 369 a.a., putative ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 357 a.a., ABC-type spermidine/putrescine transport systems, ATPase components from Variovorax sp. SCN45

 Score =  223 bits (567), Expect = 8e-63
 Identities = 146/361 (40%), Positives = 201/361 (55%), Gaps = 22/361 (6%)

Query: 7   LNLRNLACGYGDQRIVQNLNLHLNAGDIGCLLGSSGCGKTTTLRAIAGFEPVHEGEIHLA 66
           L L ++   YG  R V  +NL +  G+   LLG SGCGKTTTL+ IAGFE V  G I LA
Sbjct: 4   LRLTDVTKFYGATRAVSAMNLAVEKGEFVSLLGPSGCGKTTTLQMIAGFEAVSSGRIELA 63

Query: 67  GEVISRAGFTLAPEKRRIGMVFQDYALFPHLTVAQNIAFGIA--KHPRQAAV--IEEMLE 122
           G+ I+ A        R +G+VFQ YALFPH+TVA N++FG+   K P+      +++ L 
Sbjct: 64  GKDITHA----KANTRGLGIVFQTYALFPHMTVADNVSFGLEMRKMPKAERTERVKQALA 119

Query: 123 LVKLGGLGGRYPHELSGGQQQRVALARALAPEPQLLLLDEPFSNLDVELRRRLSHEVRDI 182
           LV L     RYP ELSGGQ+QRVALARAL  EP +LLLDEP SNLD +LR  +  E+R I
Sbjct: 120 LVHLEAHAARYPRELSGGQRQRVALARALVIEPPVLLLDEPLSNLDAKLREEMQFELRQI 179

Query: 183 LKSRGTSAILVTHDQEEAFAVSDQVGVFKEGRLEQWDTPYNLYHEPQTPFVASFIGQGYF 242
            +  GT+ ++VTHDQ EA ++SD+V V + G   Q D P  +Y  P T F+++F+G+   
Sbjct: 180 QRKVGTTTVMVTHDQSEAMSISDRVVVMEGGCATQIDHPQRVYEHPSTRFISTFVGKANL 239

Query: 243 IRGQMSSHEAVNT--EVGELRGNRAYIMAPGSSVD----VLLRPDDIVHAP--GSALMAN 294
           +  ++S   A  T  EVG L  +   +   G  VD    + +RP+ +   P     +   
Sbjct: 240 LDCRVSGSGAARTCVEVGALSLD---VDDTGFRVDTAALLSVRPEKLQLVPTGRGRIDGE 296

Query: 295 IVGKSFLGASTLYRLQLPTGSQLEAIFPS--HNDHEIGENVEIAVKADHLVLFPVPGSVA 352
           +  + FLG+  LYR+  P G  L  + P+   +  E G    I   A  + L PV     
Sbjct: 297 VQERFFLGSQWLYRIATPVG-DLTVLSPNDGRDALEEGSRTGIDWPAHCMRLLPVEEKAV 355

Query: 353 A 353
           A
Sbjct: 356 A 356