Pairwise Alignments

Query, 251 a.a., DNA-binding transcriptional repressor - GlpR-glycerol-3-phosphate from Pseudomonas putida KT2440

Subject, 253 a.a., DeoR family transcriptional regulator from Agrobacterium fabrum C58

 Score =  107 bits (266), Expect = 3e-28
 Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 4/247 (1%)

Query: 6   RQQQILELVRERGYVSIEEMAQLFVVTPQTIRRDINQLAELNLLRRYHGGAAYDSSIENT 65
           RQ++IL  + +   + + E+A+   V+ +TIRRD++++ E  LL R +GGA    S E  
Sbjct: 8   RQERILTELNQAPSLRVAELARRLDVSTETIRRDLDEMTEQGLLNRTYGGAVRSLSTE-P 66

Query: 66  AYAMRADQMRDEKQRIADAVARQIPDHASLFINIGTTTESIARAL-LNHSHLKVITNNLH 124
           +   R      E++RIA A  + +     L I  G+TT   AR + +   ++ V+T++  
Sbjct: 67  SVTERHTLFVGERERIAKAAVQILKGAQVLMIGSGSTTVHTARRIAVEMKNITVLTHSFG 126

Query: 125 VAAILAAKDDFEVLVAGGTVR-RDGGVVGQASVDFINQFKVDFALVGISGIDEDGSLLDF 183
           VA +LA     +V++  G     +G  VG  +V F+N F  DF ++G SG+  DG   D 
Sbjct: 127 VATVLAINPTIKVVMLPGDYHATEGATVGAHAVSFLNSFYADFTILGASGLGPDGP-SDA 185

Query: 184 DYQEVRVSQAIIANARQVILAADSSKFGRNAMVRLGSIDLVDCLVTDRTPTPALTQLLNQ 243
             +   V  A+++ A + I+ AD SK  R    R      +  +VTD+ P   LT+ L+ 
Sbjct: 186 LLECGAVYSAMVSRAARTIVVADHSKHDRLFPARYAPWRDIAHVVTDKAPGEDLTESLDS 245

Query: 244 NKIRLEV 250
           + ++L V
Sbjct: 246 SGVKLTV 252