Pairwise Alignments

Query, 1439 a.a., Leucine-rich repeat domain protein from Pseudomonas putida KT2440

Subject, 1629 a.a., conserved protein of unknown function containing Leucine-rich repeat domain from Pseudomonas putida KT2440

 Score =  149 bits (376), Expect = 2e-39
 Identities = 173/635 (27%), Positives = 259/635 (40%), Gaps = 66/635 (10%)

Query: 22  WLVDHAQPERLDALRNALSRQAHCNARLGPILQAIPSLQ---AYAAALLKTKLRKS---- 74
           W     +P R + L NAL  +   N RL  + QA+   +   A+   LL  +L+ +    
Sbjct: 49  WYATADEPTR-EQLHNALQTR---NKRLAQVKQALGEFKDIIAFCGPLLTERLKLNVPVD 104

Query: 75  -------GFSNPDVTGWRVRVSQRLLLPSASPVLLRPTYVRRSR-RSLLEAALHNYHRRE 126
                   F +       V   +  L+P     +L    V + + RSLLEAALHN+    
Sbjct: 105 RAQYVFQPFESEANIWVGVPDVETPLVPDVEADVLATRPVGQPQTRSLLEAALHNFE--- 161

Query: 127 TRPGLTLKG---ELVDGNGNRLPMS---FHAFASACREVDAGGKYQALLTHHLQPEDGPE 180
              GL   G    L +  G+  P++      F   CR +D G +YQ    H L   +G  
Sbjct: 162 ---GLDEVGPYSRLTNAAGSDTPLAGLTMADFVRHCRALDLGKRYQ---DHLLATHEGAN 215

Query: 181 DEPGQAVSRLHGLFEASFKAHFEVAMRVAALKQDIDERTYFFLLPLIADKPVVPALVGTV 240
               Q +S       A+ +    V   +A LK  + +     L  L    P        +
Sbjct: 216 RAEIQRLSI------AANREALRVQALIARLKGLLSKAGLDALAQLCDGSPHPTYDNEAL 269

Query: 241 VPRQLYLLGRPVQGVLTLEVRPSADAVESVVLWIPDDPHQPVSRHASWDALDKYLGKRFR 300
                 L   PV  VL +    +       ++++P D   PV   AS     K+L  R  
Sbjct: 270 HCWNFNLFDVPVHEVLFIGP-DNPYRTNPCIVYVPGDSEHPVREFASRQEAGKHLRSRLL 328

Query: 301 TPAYRRFFARFITERERINFYRVLNERVAQASTAGVE-------LDARSAPITDAPFVHL 353
              +RR    F  +  +      L   + +   AG+        +    +PI   P+ +L
Sbjct: 329 QSEFRRALVHFAYKDRQKELAVKLEIALFEEDEAGIRKPRIMPVIPFTLSPIRTDPWTNL 388

Query: 354 RRQCLAKIRDDARVLAVPTDVEDDEDREARMQGYKELGLNVLNVAGAFVPVLGEVLLVAN 413
               LA+++ DA+ +AVPT   D   R  R++ + +LG+NVLNVA  FVP L  V+L   
Sbjct: 389 YNAHLARMKADAKTIAVPTAEVDANARNERLKYWFDLGMNVLNVAAFFVPGLNTVMLGVF 448

Query: 414 AVQIADEVYEGYEDWRMGDREGALNHLFNVAANVVVGGMIAAGSKVAVRALERLAFVDDL 473
           A  +   V+ G+E W  GD   AL  L ++A N  V     AG  V  R ++   FVD L
Sbjct: 449 AYDLMSSVFTGFEAWEEGDTRQALAQLESLAINAGV----IAGFAVGTRIVQASGFVDAL 504

Query: 474 APVCNSAGKVRLMATDLPGYDAQPLRGVGAQ-EWLWH----------LDEGRYRVMEDPQ 522
             V +   +V L   D+  Y +      GAQ + L H          LD   Y V +   
Sbjct: 505 KSVWHEDKEV-LWHPDMKPYASTAAIPEGAQPDLLGHVHVDGKTYLKLDGTLYEVFQG-A 562

Query: 523 DGRSRILHPGRPSAYRPVIEQNGAGGWRHELEAPQYWEGRANLIRRLSTPLAELPEPTCD 582
           D + R+ HP    AY P +  +G   W+   E P  WE R  L RRL +  A L +   D
Sbjct: 563 DQQWRVRHPDDAQAYAPRLLHHGNARWQLAHEQPLEWE-REQLARRLGSHSAGLDDSELD 621

Query: 583 YLLQVTGLSEAQIRRLHVEHMGAPARLLDALELYQ 617
           + ++ TG     +RR     +  PA L+D L+  Q
Sbjct: 622 HAMRTTGTDPDVLRRAQAAGLPPPALLIDTLQRLQ 656



 Score =  118 bits (296), Expect = 4e-30
 Identities = 178/761 (23%), Positives = 284/761 (37%), Gaps = 140/761 (18%)

Query: 799  AVSPGALGSLLIEAAAGDRTQAAELCGMPRLGVGLRPPTRFGDGRIGYALSGRGESSRR- 857
            A  P A  + L++ A GDR   A L G   +    R P R  +GR+GY LSGRG   R  
Sbjct: 873  AAHPQAEPARLLQLALGDRQHCASLLGQQPINPRFRSPLRLANGRLGYPLSGRGLQGRAL 932

Query: 858  AIGRGIHQVFPTMTDGELQAYLLDLMERRVGLWEHYSQLTGQLARLRQSLRQWRRDASNP 917
               R +  ++P ++  ++     +L  R   L    +QL  +   L + L +W   A   
Sbjct: 933  PAARRLRALYPELSSEQITGLQAEL-ARGGDLGSAINQLEVEQRTLNRDLNRWVSTARTL 991

Query: 918  LDALRRRRVATAVRRSWRRKITDEAGDYALIISGERIGSLPELPEGVSFDHVRRLILSDL 977
             +   R++    +  + RR+   +A    L++   ++ +LP         H+R L L  L
Sbjct: 992  EERFDRQQCTERLMSASRREGGAQA--ETLVLDRMQLEALPAFT--ARMPHIRNLRLEGL 1047

Query: 978  GLGEINADFLRRFPNLIELDLSGN---RLTAIPHGIEHMPRLRQLNLRRNSV-IMDEAGE 1033
             +  +   FL  FPNL  L++ GN       +   +   PRLR+L L  N +  +    +
Sbjct: 1048 QMRRLEGSFLTNFPNLETLEIVGNPDIDAETLFEALRSAPRLRELGLTDNGLTTLSPTAQ 1107

Query: 1034 LRLAGMSALRYLDLSHNPLGRAPVLTRLGNLREVNLRSAGL--------EALPEQISFRA 1085
              +  M  LR L LS N L      T LG L  + L + GL        E+L  Q     
Sbjct: 1108 QAIGAMPGLRLLWLSRNRLQLD--TTSLGFLTRLPLDALGLAHNQITLDESLAAQFQDMI 1165

Query: 1086 H------------------VDVRNNNIRTLRRELQQL-----------RRQVHQLSLHDN 1116
            H                     R  ++   R ELQQ            + Q+  L+L  N
Sbjct: 1166 HPVLLHLSGNPLQLAPDLRFMARLVHLELERCELQQWPDSLTVLMSQPQYQLRYLNLSSN 1225

Query: 1117 --------------PLGEADALLLDEARGVAPGQWGSASARHRAIDSDL--------FNT 1154
                          P     A  L E R +       A  R R   S +           
Sbjct: 1226 RIRTLPDLPGVLRTPFARDVAAHLPERRWLFNYNTLEAQTRARLGSSGVNVFEHAEDVPL 1285

Query: 1155 WANSTADAERDRQQAIWTALLEEPHSDGMFRFLADFVHGEDFEQHPGHYRSRIWRILETC 1214
            W         + ++ +W+ L ++  +  +   L       + ++     R+R+W++L+  
Sbjct: 1286 WQGVFRGEASNAEEQLWSDLFDQGENAALLGVLERLAQSAEAQRDGEALRTRVWKLLDDA 1345

Query: 1215 EQHEQLRHQLFLEASG-PRSCEDRLLLLLEQMELGVLVLRAVEDAHGSRMEARLLSLARG 1273
                 LR +L   A   P +C D        +E+ VL   A   A GSR  A LLSL   
Sbjct: 1346 AHDTVLRERLATVAGDFPPTCGDAGADAFSALEIEVLAHEAAAVA-GSR-PADLLSLYGK 1403

Query: 1274 LFRLDEVDRHA-------TLHVQRM----HAEHAPH-------------------IDEIE 1303
            L+R  +V++ A       +L  Q +      E+ P                    +D++E
Sbjct: 1404 LYRRSQVNQLADRISWRRSLRKQALLDGAFDENLPPYDELDDPSAFPDSELQTGLVDDVE 1463

Query: 1304 TRLFYRQRLARPLGLPIELDEMHYPSFANVTTSNLLRVQDAVLQNESTDALIAS--LAQR 1361
             RL  RQ LA  L  P     M Y + A +  + +  V+ AVL  +  DA+     L Q+
Sbjct: 1464 VRLALRQSLASALDYPEPSRGMLYRNTARINDTIIEMVKAAVLSLD-RDAIAREQWLTQQ 1522

Query: 1362 PFWEQYAREFHAQRFEDLVQPLHQRMEALQAQVDEQ------------------------ 1397
            P W +Y +  HA +F  +       ++ L   +DE                         
Sbjct: 1523 PGWVEYLKREHAAQFSLITDFWRPGLDYLYYCLDETAEPVTSLDSSVRRALARVMPESPV 1582

Query: 1398 ---------VISENEFLQRCEALKADFDRSERALLARLARE 1429
                     V++E ++ Q  +AL A+  + E  LL  L R+
Sbjct: 1583 DADGRLRRVVLNEQQYRQGVDALTAEQQQVETGLLISLTRQ 1623