Pairwise Alignments

Query, 306 a.a., glutamate / aspartate ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 308 a.a., ABC transporter from Pseudomonas simiae WCS417

 Score =  462 bits (1189), Expect = e-135
 Identities = 236/307 (76%), Positives = 263/307 (85%), Gaps = 3/307 (0%)

Query: 2   MRIVRQLLGAAIAAAVIASPAMAEELTGTLKKIKESGTITLGHRDSSIPFSYLA-GKPEP 60
           MRIV  +LGAAIAAA+I++P  A ELTGTLKKI +SGTITL HRDSSIPFSY+A G  +P
Sbjct: 1   MRIVPHILGAAIAAALISTPVFAAELTGTLKKINDSGTITLAHRDSSIPFSYIADGSGKP 60

Query: 61  VGYSHDIQLAVVDALKKQLGT-DIKVRYNLVTSQTRIPLVQNGTVDLECGSTTNNVERQQ 119
           VGYSHDIQLAVV+ LKK L   D+K +YNLVTSQTRIPL+QNGT DLECGSTTNN ER Q
Sbjct: 61  VGYSHDIQLAVVEQLKKDLNKPDLKAKYNLVTSQTRIPLIQNGTADLECGSTTNNAERAQ 120

Query: 120 QVGFSVGIFEVGTRLLTKV-KDGQPAYKDFPDLAGKNVVTTAGTTSERILKAMNADKQMK 178
           QV F+V IFE+GTRLL K  KDG+P+Y DF DL GKNVVTTAGTTSERI+KAMNADKQM 
Sbjct: 121 QVDFTVNIFEIGTRLLVKKDKDGKPSYADFADLKGKNVVTTAGTTSERIIKAMNADKQMG 180

Query: 179 MNVISAKDHGEAFNMLESGRAVAFMMDDALLAGEMAKARKPADWVITGTPQSYEIYGCMV 238
           MNVISAKDHGE+F MLESGRAVAFMMDDALLAGE AKA+KP DWVITGTPQS+E Y CMV
Sbjct: 181 MNVISAKDHGESFQMLESGRAVAFMMDDALLAGEEAKAKKPDDWVITGTPQSFEAYACMV 240

Query: 239 RKDDAAFKKAVDDAIVAYFKSGEVNKSYEKWFMQPIPPKGLNLNFQMSEELKKLIAEPTD 298
           RKDD AFKKAVDDAIVA +KSGE+NK Y KWF  PIPPKGLNLNF MS+++K+LIA P+D
Sbjct: 241 RKDDPAFKKAVDDAIVALYKSGEINKIYSKWFESPIPPKGLNLNFPMSDKVKELIANPSD 300

Query: 299 KAADEKK 305
           K A + K
Sbjct: 301 KPAPDVK 307