Pairwise Alignments

Query, 306 a.a., glutamate / aspartate ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 302 a.a., Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score =  233 bits (595), Expect = 3e-66
 Identities = 125/300 (41%), Positives = 195/300 (65%), Gaps = 4/300 (1%)

Query: 1   MMRIVRQLLGAAIAAAVIASPAMAEELTGTLKKIKESGTITLGHRDSSIPFSYLAGKPEP 60
           +M+ +  LL A +  A  A  A A+EL GTL K + SGTI +G+R+SS+PFS+L  + EP
Sbjct: 6   IMKRIAGLLLATVTLATAAVAAQAQELIGTLAKARASGTIAIGYRESSVPFSFLNTRKEP 65

Query: 61  VGYSHDIQLAVVDALKKQLGTDIKVRYNLVTSQTRIPLVQNGTVDLECGSTTNNVERQQQ 120
           +GYS ++  ++V A++  +   + +++  VTS +RI  V +G VDLECGSTTNN+ERQ++
Sbjct: 66  IGYSIELCRSLVSAIEDAVNKSLAIQWVPVTSDSRIDAVVSGKVDLECGSTTNNLERQKR 125

Query: 121 VGFSVGIFEVGTRLLTKVKDGQPAYKDFPDLAGKNVVTTAGTTSERILKAMNADKQMKMN 180
           V FS  +F  GT++L  V+ G P  K F DLAG+ V  TAGTT+E+ L+ ++A  ++ ++
Sbjct: 126 VSFSPTMFVSGTKVL--VRKGSP-IKSFRDLAGRKVAVTAGTTNEKTLRDLSAKFKLGID 182

Query: 181 VISAKDHGEAFNMLESGRAVAFMMDDALLAGEMAKARKPADWVITGTPQSYEIYGCMVRK 240
           ++ A+DH E+F +++SG+A AF  DD LL G +A+    AD+ + G   SY+ YG M RK
Sbjct: 183 LLVARDHAESFGLVKSGQADAFATDDVLLYGLIAQDAAKADYEVVGDFLSYDPYGIMYRK 242

Query: 241 DDAAFKKAVDDAIVAYFKSGEVNKSYEKWFMQPIPPKGLNLNFQMSEELKKLIAEPTDKA 300
           DD    K V DA     + GE+ + Y++WF++ + P G ++N  MS +L+ +I   + KA
Sbjct: 243 DDPQLNKVVIDAFQVLAEDGEIERQYKRWFLRKL-PTGESINLPMSAQLETIIQTMSVKA 301